Gene annotation
Transcriptome id Sobic.002G017300.1
Synonym Sb02g001658
Functional annotation expressed protein
UniProt C5X823
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a045636 , Zm00025a044935
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G082300 cytochrome P450, putative, expressed -
2 Sobic.001G471900 C2 domain containing protein, putative, expressed -
3 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.008G106800 isoflavone reductase, putative, expressed -
5 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
7 Sobic.007G034700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein terpene synthase 6 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
8 Sobic.008G126200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
9 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
10 Sobic.004G067000 expressed protein -
11 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.003G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.009G022000 white-brown complex homolog protein 16, putative, expressed -
15 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
16 Sobic.010G209501 - -
17 Sobic.001G516500 expansin precursor, putative, expressed -
18 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.007G035600 MSP domain containing protein, putative, expressed -
20 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -


Gene co-expression network
sample Sobic002G017300 Sobic002G017300 Sobic001G082300 Sobic001G082300 Sobic002G017300--Sobic001G082300 Sobic001G471900 Sobic001G471900 Sobic002G017300--Sobic001G471900 Sobic003G044900 Sobic003G044900 Sobic002G017300--Sobic003G044900 Sobic008G106800 Sobic008G106800 Sobic002G017300--Sobic008G106800 Sobic004G164500 Sobic004G164500 Sobic002G017300--Sobic004G164500 Sobic003G328800 Sobic003G328800 Sobic002G017300--Sobic003G328800 Sobic007G034700 Sobic007G034700 Sobic002G017300--Sobic007G034700 Sobic008G126200 Sobic008G126200 Sobic002G017300--Sobic008G126200 Sobic006G213100 Sobic006G213100 Sobic002G017300--Sobic006G213100 Sobic002G377000 Sobic002G377000 Sobic001G082300--Sobic002G377000 Sobic001G032100 Sobic001G032100 Sobic001G082300--Sobic001G032100 Sobic001G082300--Sobic002G017300 Sobic001G082300--Sobic008G126200 Sobic003G296600 Sobic003G296600 Sobic001G082300--Sobic003G296600 Sobic006G194150 Sobic006G194150 Sobic001G082300--Sobic006G194150 Sobic001G082300--Sobic003G328800 Sobic001G082300--Sobic004G164500 Sobic006G184300 Sobic006G184300 Sobic001G082300--Sobic006G184300 Sobic001G056700 Sobic001G056700 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic010G228600 Sobic010G228600 Sobic001G471900--Sobic010G228600 Sobic010G154150 Sobic010G154150 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic006G257900 Sobic006G257900 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic002G221900 Sobic002G221900 Sobic003G044900--Sobic002G221900 Sobic004G212800 Sobic004G212800 Sobic003G044900--Sobic004G212800 Sobic004G143700 Sobic004G143700 Sobic003G044900--Sobic004G143700 Sobic001G024200 Sobic001G024200 Sobic003G044900--Sobic001G024200 Sobic007G073400 Sobic007G073400 Sobic003G044900--Sobic007G073400 Sobic002G221700 Sobic002G221700 Sobic003G044900--Sobic002G221700 Sobic003G015000 Sobic003G015000 Sobic003G044900--Sobic003G015000 Sobic002G039500 Sobic002G039500 Sobic003G044900--Sobic002G039500 Sobic009G214600 Sobic009G214600 Sobic003G044900--Sobic009G214600 Sobic008G106800--Sobic004G164500 Sobic008G106800--Sobic001G471900 Sobic008G106800--Sobic001G056700 Sobic009G065000 Sobic009G065000 Sobic008G106800--Sobic009G065000 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic008G106800--Sobic001G311000 Sobic002G278300 Sobic002G278300 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic003G328800--Sobic006G213100 Sobic005G012000 Sobic005G012000 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G397300 Sobic003G397300 Sobic003G328800--Sobic003G397300 Sobic003G328800--Sobic008G126200 Sobic003G380500 Sobic003G380500 Sobic003G328800--Sobic003G380500 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G328800--Sobic003G044900 Sobic007G034700--Sobic001G471900 Sobic007G034700--Sobic002G017300 Sobic007G034700--Sobic010G154150 Sobic009G166700 Sobic009G166700 Sobic007G034700--Sobic009G166700 Sobic001G515500 Sobic001G515500 Sobic007G034700--Sobic001G515500 Sobic007G034700--Sobic004G164500 Sobic007G034700--Sobic008G106800 Sobic004G274700 Sobic004G274700 Sobic007G034700--Sobic004G274700 Sobic007G034700--Sobic001G056700 Sobic008G126200--Sobic006G184300 SobicK024000 SobicK024000 Sobic008G126200--SobicK024000 Sobic002G270300 Sobic002G270300 Sobic008G126200--Sobic002G270300 Sobic007G023700 Sobic007G023700 Sobic008G126200--Sobic007G023700 Sobic008G009500 Sobic008G009500 Sobic008G126200--Sobic008G009500 Sobic001G347600 Sobic001G347600 Sobic008G126200--Sobic001G347600 Sobic008G126200--Sobic005G012000 Sobic003G093600 Sobic003G093600 Sobic008G126200--Sobic003G093600 Sobic002G108800 Sobic002G108800 Sobic008G126200--Sobic002G108800 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic006G213100--Sobic009G214600 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500
Octagon: transcription factors


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