Gene annotation
Transcriptome id Sobic.007G034700.5,Sobic.007G034700.4,Sobic.007G034700.3,Sobic.007G034700.7,Sobic.007G034700.6
Synonym ATTPS21, TPS21, Sb07g002990,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein terpene synthase 6 (Os) (PubMedID : 27208977)
terpene synthase, putative, expressed
UniProt A0A1Z5R7V4 , A0A1Z5R8Y9 , A0A1B6PFB6
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF4
NCBI CDD -
KEGG Orthology K15803; (-)-germacrene D synthase
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G23960 : terpene synthase 21
RAP-DB (Rice) LOC_Os08g04500.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) Zm00025a054942
Brachypodium -
Barley HORVU6Hr1G009160.1
Wheat TraesCS6B02G060300 , TraesCS6D02G051400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G471900 C2 domain containing protein, putative, expressed -
2 Sobic.002G017300 expressed protein -
3 Sobic.010G154150 - -
4 Sobic.009G166700 expressed protein -
5 Sobic.001G515500 LYM2 lysm domain GPI-anchored protein 2 precursor("PubMedID : 26759170,PubMedID : 24597475")@lysM domain-containing GPI-anchored protein precursor, putative, expressed K13473: chitin elicitor-binding protein
6 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
7 Sobic.008G106800 isoflavone reductase, putative, expressed -
8 Sobic.004G274700 SNARE associated Golgi protein, putative, expressed -
9 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
10 Sobic.002G382950 - -
11 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
12 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
13 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.002G002900 - -
15 Sobic.006G134100 carbonyl reductase 3, putative, expressed -
16 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
17 Sobic.009G040900 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
18 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G164650 - -
20 Sobic.006G202500 immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase


Gene co-expression network
sample Sobic007G034700 Sobic007G034700 Sobic001G471900 Sobic001G471900 Sobic007G034700--Sobic001G471900 Sobic002G017300 Sobic002G017300 Sobic007G034700--Sobic002G017300 Sobic010G154150 Sobic010G154150 Sobic007G034700--Sobic010G154150 Sobic009G166700 Sobic009G166700 Sobic007G034700--Sobic009G166700 Sobic001G515500 Sobic001G515500 Sobic007G034700--Sobic001G515500 Sobic004G164500 Sobic004G164500 Sobic007G034700--Sobic004G164500 Sobic008G106800 Sobic008G106800 Sobic007G034700--Sobic008G106800 Sobic004G274700 Sobic004G274700 Sobic007G034700--Sobic004G274700 Sobic001G056700 Sobic001G056700 Sobic007G034700--Sobic001G056700 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic010G228600 Sobic010G228600 Sobic001G471900--Sobic010G228600 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic006G257900 Sobic006G257900 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic001G082300 Sobic001G082300 Sobic002G017300--Sobic001G082300 Sobic002G017300--Sobic001G471900 Sobic003G044900 Sobic003G044900 Sobic002G017300--Sobic003G044900 Sobic002G017300--Sobic008G106800 Sobic002G017300--Sobic004G164500 Sobic003G328800 Sobic003G328800 Sobic002G017300--Sobic003G328800 Sobic002G017300--Sobic007G034700 Sobic008G126200 Sobic008G126200 Sobic002G017300--Sobic008G126200 Sobic006G213100 Sobic006G213100 Sobic002G017300--Sobic006G213100 Sobic010G154150--Sobic006G257900 Sobic010G154150--Sobic004G164500 Sobic010G154150--Sobic001G471900 Sobic010G154150--Sobic010G228600 Sobic009G034400 Sobic009G034400 Sobic010G154150--Sobic009G034400 Sobic010G154150--Sobic001G056700 Sobic010G154150--Sobic008G106800 Sobic010G218100 Sobic010G218100 Sobic010G154150--Sobic010G218100 Sobic009G036900 Sobic009G036900 Sobic010G154150--Sobic009G036900 Sobic002G278300 Sobic002G278300 Sobic009G166700--Sobic002G278300 Sobic009G166700--Sobic001G471900 Sobic004G069200 Sobic004G069200 Sobic009G166700--Sobic004G069200 Sobic009G166700--Sobic001G056700 Sobic009G040900 Sobic009G040900 Sobic009G166700--Sobic009G040900 Sobic009G055100 Sobic009G055100 Sobic009G166700--Sobic009G055100 Sobic005G078800 Sobic005G078800 Sobic009G166700--Sobic005G078800 Sobic009G166700--Sobic002G291300 Sobic009G155050 Sobic009G155050 Sobic009G166700--Sobic009G155050 Sobic001G381800 Sobic001G381800 Sobic001G515500--Sobic001G381800 Sobic003G311200 Sobic003G311200 Sobic001G515500--Sobic003G311200 Sobic001G515500--Sobic007G034700 Sobic003G396000 Sobic003G396000 Sobic001G515500--Sobic003G396000 Sobic009G011901 Sobic009G011901 Sobic001G515500--Sobic009G011901 Sobic002G382950 Sobic002G382950 Sobic001G515500--Sobic002G382950 Sobic001G082400 Sobic001G082400 Sobic001G515500--Sobic001G082400 Sobic001G076000 Sobic001G076000 Sobic001G515500--Sobic001G076000 Sobic001G071100 Sobic001G071100 Sobic001G515500--Sobic001G071100 Sobic004G164500--Sobic001G471900 Sobic001G311000 Sobic001G311000 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic008G106800--Sobic004G164500 Sobic008G106800--Sobic001G471900 Sobic008G106800--Sobic001G056700 Sobic008G106800--Sobic009G065000 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic008G106800--Sobic001G311000 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic001G478300 Sobic001G478300 Sobic004G274700--Sobic001G478300 Sobic004G231400 Sobic004G231400 Sobic004G274700--Sobic004G231400 Sobic001G371300 Sobic001G371300 Sobic004G274700--Sobic001G371300 Sobic004G274700--Sobic003G273100 Sobic001G149700 Sobic001G149700 Sobic004G274700--Sobic001G149700 Sobic006G209500 Sobic006G209500 Sobic004G274700--Sobic006G209500 Sobic010G071200 Sobic010G071200 Sobic004G274700--Sobic010G071200 Sobic004G274700--Sobic006G257900 Sobic004G274700--Sobic003G137400 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G056700--Sobic001G082400 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic001G056700--Sobic002G278300
Octagon: transcription factors


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