Gene annotation
Transcriptome id Sobic.003G408200.1
Synonym Sb03g044300
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XGD4
Pfam PF14364
Panther DB PTHR35762 PTHR35762:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50610 : -
RAP-DB (Rice) LOC_Os01g69960.1 : expressed protein
MaizeGDB (Corn) Zm00025a039270 , Zm00025a026227
Brachypodium PNT73506
Barley HORVU3Hr1G095340.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241300 expressed protein -
2 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
3 Sobic.002G330700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
4 Sobic.005G026800 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
5 Sobic.010G154150 - -
6 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
7 Sobic.001G471900 C2 domain containing protein, putative, expressed -
8 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
9 Sobic.004G157300 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
10 Sobic.001G225100 expressed protein -
11 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
12 Sobic.005G110520 - -
13 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
15 Sobic.005G194800 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
16 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.002G254200 expressed protein -
20 Sobic.006G163100 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic003G408200 Sobic003G408200 Sobic006G241300 Sobic006G241300 Sobic003G408200--Sobic006G241300 Sobic003G296600 Sobic003G296600 Sobic003G408200--Sobic003G296600 Sobic002G330700 Sobic002G330700 Sobic003G408200--Sobic002G330700 Sobic005G026800 Sobic005G026800 Sobic003G408200--Sobic005G026800 Sobic010G154150 Sobic010G154150 Sobic003G408200--Sobic010G154150 Sobic001G247400 Sobic001G247400 Sobic003G408200--Sobic001G247400 Sobic001G471900 Sobic001G471900 Sobic003G408200--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic003G408200--Sobic001G056700 Sobic004G157300 Sobic004G157300 Sobic003G408200--Sobic004G157300 Sobic003G406900 Sobic003G406900 Sobic006G241300--Sobic003G406900 Sobic006G241300--Sobic003G408200 Sobic004G164500 Sobic004G164500 Sobic006G241300--Sobic004G164500 Sobic006G241300--Sobic005G026800 Sobic006G241300--Sobic003G296600 Sobic002G254200 Sobic002G254200 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic003G293900 Sobic003G293900 Sobic006G241300--Sobic003G293900 Sobic006G191600 Sobic006G191600 Sobic006G241300--Sobic006G191600 Sobic001G032100 Sobic001G032100 Sobic003G296600--Sobic001G032100 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic004G221900 Sobic004G221900 Sobic003G296600--Sobic004G221900 Sobic001G225100 Sobic001G225100 Sobic003G296600--Sobic001G225100 Sobic006G194150 Sobic006G194150 Sobic003G296600--Sobic006G194150 Sobic002G246600 Sobic002G246600 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic006G184300 Sobic006G184300 Sobic003G296600--Sobic006G184300 Sobic006G163100 Sobic006G163100 Sobic002G330700--Sobic006G163100 Sobic002G330700--Sobic003G293900 Sobic002G330700--Sobic003G408200 Sobic002G330700--Sobic006G241300 Sobic002G330700--Sobic002G254200 Sobic002G330700--Sobic003G296600 Sobic007G177100 Sobic007G177100 Sobic002G330700--Sobic007G177100 Sobic002G330700--Sobic004G164500 Sobic007G126100 Sobic007G126100 Sobic002G330700--Sobic007G126100 Sobic005G026800--Sobic006G241300 Sobic003G208700 Sobic003G208700 Sobic005G026800--Sobic003G208700 Sobic007G068800 Sobic007G068800 Sobic005G026800--Sobic007G068800 Sobic005G026800--Sobic003G408200 Sobic007G063700 Sobic007G063700 Sobic005G026800--Sobic007G063700 Sobic005G026600 Sobic005G026600 Sobic005G026800--Sobic005G026600 Sobic005G110520 Sobic005G110520 Sobic005G026800--Sobic005G110520 Sobic006G019801 Sobic006G019801 Sobic005G026800--Sobic006G019801 Sobic003G201850 Sobic003G201850 Sobic005G026800--Sobic003G201850 Sobic006G257900 Sobic006G257900 Sobic010G154150--Sobic006G257900 Sobic010G154150--Sobic004G164500 Sobic010G154150--Sobic001G471900 Sobic010G228600 Sobic010G228600 Sobic010G154150--Sobic010G228600 Sobic009G034400 Sobic009G034400 Sobic010G154150--Sobic009G034400 Sobic010G154150--Sobic001G056700 Sobic008G106800 Sobic008G106800 Sobic010G154150--Sobic008G106800 Sobic010G218100 Sobic010G218100 Sobic010G154150--Sobic010G218100 Sobic009G036900 Sobic009G036900 Sobic010G154150--Sobic009G036900 Sobic001G247400--Sobic003G296600 Sobic001G247400--Sobic001G032100 Sobic001G247400--Sobic001G225100 Sobic003G034500 Sobic003G034500 Sobic001G247400--Sobic003G034500 Sobic009G022000 Sobic009G022000 Sobic001G247400--Sobic009G022000 Sobic001G247400--Sobic003G293900 Sobic001G247400--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic001G247400--Sobic001G311000 Sobic001G247400--Sobic002G246600 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic001G056700--Sobic002G278300 Sobic009G030100 Sobic009G030100 Sobic004G157300--Sobic009G030100 Sobic004G157300--Sobic003G293900 Sobic004G157300--Sobic001G056700 Sobic004G157300--Sobic004G164500 Sobic001G516500 Sobic001G516500 Sobic004G157300--Sobic001G516500 Sobic004G157300--Sobic006G241300 Sobic004G157300--Sobic001G471900 Sobic004G157300--Sobic003G296600 Sobic004G157300--Sobic006G194150
Octagon: transcription factors


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