Gene annotation
Transcriptome id Sobic.002G330700.1
Synonym Sb02g035720
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
expressed protein
UniProt C5XAU6
Pfam -
Panther DB PTHR35318:SF3 PTHR35318
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36210.1 : expressed protein
MaizeGDB (Corn) Zm00025a048326
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G163100 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
2 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
3 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G241300 expressed protein -
5 Sobic.002G254200 expressed protein -
6 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
7 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
9 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
11 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
12 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
13 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
14 Sobic.009G075900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
15 Sobic.001G311000 expansin precursor, putative, expressed -
16 Sobic.004G157300 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
17 Sobic.006G191600 expressed protein -
18 Sobic.009G030100 expressed protein -
19 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
20 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -


Gene co-expression network
sample Sobic002G330700 Sobic002G330700 Sobic006G163100 Sobic006G163100 Sobic002G330700--Sobic006G163100 Sobic003G293900 Sobic003G293900 Sobic002G330700--Sobic003G293900 Sobic003G408200 Sobic003G408200 Sobic002G330700--Sobic003G408200 Sobic006G241300 Sobic006G241300 Sobic002G330700--Sobic006G241300 Sobic002G254200 Sobic002G254200 Sobic002G330700--Sobic002G254200 Sobic003G296600 Sobic003G296600 Sobic002G330700--Sobic003G296600 Sobic007G177100 Sobic007G177100 Sobic002G330700--Sobic007G177100 Sobic004G164500 Sobic004G164500 Sobic002G330700--Sobic004G164500 Sobic007G126100 Sobic007G126100 Sobic002G330700--Sobic007G126100 Sobic006G163100--Sobic002G330700 Sobic006G163100--Sobic003G293900 Sobic006G163100--Sobic003G296600 Sobic006G163100--Sobic002G254200 Sobic004G035200 Sobic004G035200 Sobic006G163100--Sobic004G035200 Sobic009G100800 Sobic009G100800 Sobic006G163100--Sobic009G100800 Sobic003G402300 Sobic003G402300 Sobic006G163100--Sobic003G402300 Sobic001G247400 Sobic001G247400 Sobic006G163100--Sobic001G247400 Sobic006G269200 Sobic006G269200 Sobic006G163100--Sobic006G269200 Sobic003G293900--Sobic003G296600 Sobic009G030100 Sobic009G030100 Sobic003G293900--Sobic009G030100 Sobic001G032100 Sobic001G032100 Sobic003G293900--Sobic001G032100 Sobic006G194150 Sobic006G194150 Sobic003G293900--Sobic006G194150 Sobic002G421600 Sobic002G421600 Sobic003G293900--Sobic002G421600 Sobic003G293900--Sobic001G247400 Sobic003G293900--Sobic002G330700 Sobic001G311000 Sobic001G311000 Sobic003G293900--Sobic001G311000 Sobic003G293900--Sobic007G126100 Sobic003G408200--Sobic006G241300 Sobic003G408200--Sobic003G296600 Sobic003G408200--Sobic002G330700 Sobic005G026800 Sobic005G026800 Sobic003G408200--Sobic005G026800 Sobic010G154150 Sobic010G154150 Sobic003G408200--Sobic010G154150 Sobic003G408200--Sobic001G247400 Sobic001G471900 Sobic001G471900 Sobic003G408200--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic003G408200--Sobic001G056700 Sobic004G157300 Sobic004G157300 Sobic003G408200--Sobic004G157300 Sobic003G406900 Sobic003G406900 Sobic006G241300--Sobic003G406900 Sobic006G241300--Sobic003G408200 Sobic006G241300--Sobic004G164500 Sobic006G241300--Sobic005G026800 Sobic006G241300--Sobic003G296600 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic006G241300--Sobic003G293900 Sobic006G191600 Sobic006G191600 Sobic006G241300--Sobic006G191600 Sobic001G225200 Sobic001G225200 Sobic002G254200--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic006G154500 Sobic006G154500 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic006G157500 Sobic006G157500 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic003G296600--Sobic001G032100 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic004G221900 Sobic004G221900 Sobic003G296600--Sobic004G221900 Sobic001G225100 Sobic001G225100 Sobic003G296600--Sobic001G225100 Sobic003G296600--Sobic006G194150 Sobic002G246600 Sobic002G246600 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic006G184300 Sobic006G184300 Sobic003G296600--Sobic006G184300 Sobic007G177100--Sobic009G159200 Sobic007G177100--Sobic007G126100 Sobic004G212900 Sobic004G212900 Sobic007G177100--Sobic004G212900 Sobic007G177100--Sobic006G157500 Sobic004G166400 Sobic004G166400 Sobic007G177100--Sobic004G166400 Sobic010G030401 Sobic010G030401 Sobic007G177100--Sobic010G030401 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic008G106800 Sobic008G106800 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic006G257900 Sobic006G257900 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic004G164500--Sobic007G177100 Sobic007G126100--Sobic007G177100 Sobic007G126100--Sobic004G212900 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400
Octagon: transcription factors


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