Gene annotation
Transcriptome id Sobic.009G075900.1,Sobic.009G075900.2
Synonym NIP1, Sb09g006390, NLM2, ATNLM2, 2
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
aquaporin protein, putative, expressed
UniProt C5YUM4
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF141
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09874; aquaporin NIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G18910 : NOD26-like intrinsic protein 1;2
RAP-DB (Rice) LOC_Os05g11560.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a043133
Brachypodium KQK07073 , KQJ94164
Barley HORVU1Hr1G047100.8 , HORVU1Hr1G047100.3 , HORVU1Hr1G047100.1 , HORVU1Hr1G047100.7 , HORVU1Hr1G047100.6 , HORVU1Hr1G047100.5 , HORVU1Hr1G047100.13 , HORVU1Hr1G047100.12 , HORVU1Hr1G047100.10 , HORVU7Hr1G043590.6 , HORVU7Hr1G043590.7 , HORVU7Hr1G043590.4 , HORVU7Hr1G043590.5 , HORVU7Hr1G043590.2 , HORVU7Hr1G043590.3 , HORVU7Hr1G043590.1 , HORVU7Hr1G043590.8 , HORVU7Hr1G043600.2 , HORVU7Hr1G043600.3 , HORVU7Hr1G043600.1 , HORVU7Hr1G043600.6 , HORVU7Hr1G043600.4 , HORVU7Hr1G043600.5 , HORVU5Hr1G085710.4 , HORVU5Hr1G085710.5 , HORVU5Hr1G085710.6 , HORVU5Hr1G085710.7 , HORVU5Hr1G085710.1 , HORVU5Hr1G085710.3 , HORVU5Hr1G085710.9 , HORVU7Hr1G121250.6 , HORVU7Hr1G121250.5 , HORVU7Hr1G121250.2 , HORVU7Hr1G121250.3 , HORVU5Hr1G085710.10 , HORVU5Hr1G085710.11
Wheat TraesCS7A02G215700 , TraesCS7D02G217400 , TraesCS7A02G553000 , TraesCS7B02G122600 , TraesCS7B02G122600 , TraesCS7B02G476700 , TraesCS1A02G177500 , TraesCS7D02G539500 , TraesCS1D02G176000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
2 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
4 Sobic.004G225900 GEM, putative, expressed -
5 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.009G159200 guanylyl cyclase, putative, expressed -
7 Sobic.003G087300 nuclease PA3, putative, expressed -
8 Sobic.001G070800 expressed protein -
9 Sobic.006G154500 GEM, putative, expressed -
10 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
11 Sobic.009G077800 expressed protein -
12 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
14 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
16 Sobic.004G166400 expressed protein -
17 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
18 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
19 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
20 Sobic.005G063100 expressed protein -


Gene co-expression network
sample Sobic009G075900 Sobic009G075900 Sobic002G353800 Sobic002G353800 Sobic009G075900--Sobic002G353800 Sobic002G416600 Sobic002G416600 Sobic009G075900--Sobic002G416600 Sobic003G303100 Sobic003G303100 Sobic009G075900--Sobic003G303100 Sobic004G225900 Sobic004G225900 Sobic009G075900--Sobic004G225900 Sobic001G025300 Sobic001G025300 Sobic009G075900--Sobic001G025300 Sobic009G159200 Sobic009G159200 Sobic009G075900--Sobic009G159200 Sobic003G087300 Sobic003G087300 Sobic009G075900--Sobic003G087300 Sobic001G070800 Sobic001G070800 Sobic009G075900--Sobic001G070800 Sobic006G154500 Sobic006G154500 Sobic009G075900--Sobic006G154500 Sobic002G353800--Sobic009G075900 Sobic002G353800--Sobic003G303100 Sobic004G203700 Sobic004G203700 Sobic002G353800--Sobic004G203700 Sobic002G353800--Sobic009G159200 Sobic001G004800 Sobic001G004800 Sobic002G353800--Sobic001G004800 Sobic001G372100 Sobic001G372100 Sobic002G353800--Sobic001G372100 Sobic002G353800--Sobic001G070800 Sobic008G050600 Sobic008G050600 Sobic002G353800--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic002G353800--Sobic003G345100 Sobic002G416600--Sobic003G087300 Sobic005G051200 Sobic005G051200 Sobic002G416600--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic002G416600--Sobic001G317200 Sobic002G416600--Sobic001G025300 Sobic002G416600--Sobic001G070800 Sobic004G166700 Sobic004G166700 Sobic002G416600--Sobic004G166700 Sobic002G416600--Sobic008G050600 Sobic001G252300 Sobic001G252300 Sobic002G416600--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G416600--Sobic010G239300 Sobic002G055700 Sobic002G055700 Sobic003G303100--Sobic002G055700 Sobic001G318700 Sobic001G318700 Sobic003G303100--Sobic001G318700 Sobic004G189400 Sobic004G189400 Sobic003G303100--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic003G303100--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic004G148200 Sobic004G148200 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic005G063100 Sobic005G063100 Sobic003G303100--Sobic005G063100 Sobic001G247600 Sobic001G247600 Sobic004G225900--Sobic001G247600 Sobic002G017800 Sobic002G017800 Sobic004G225900--Sobic002G017800 Sobic001G318500 Sobic001G318500 Sobic004G225900--Sobic001G318500 Sobic009G077800 Sobic009G077800 Sobic004G225900--Sobic009G077800 Sobic002G302500 Sobic002G302500 Sobic004G225900--Sobic002G302500 Sobic010G270500 Sobic010G270500 Sobic004G225900--Sobic010G270500 Sobic009G111000 Sobic009G111000 Sobic004G225900--Sobic009G111000 Sobic002G004900 Sobic002G004900 Sobic004G225900--Sobic002G004900 Sobic001G325400 Sobic001G325400 Sobic004G225900--Sobic001G325400 Sobic001G025101 Sobic001G025101 Sobic001G025300--Sobic001G025101 Sobic001G025300--Sobic002G416600 Sobic002G183200 Sobic002G183200 Sobic001G025300--Sobic002G183200 Sobic003G286600 Sobic003G286600 Sobic001G025300--Sobic003G286600 Sobic001G025300--Sobic005G051200 Sobic001G025300--Sobic001G317200 Sobic001G025300--Sobic004G166700 Sobic006G099900 Sobic006G099900 Sobic001G025300--Sobic006G099900 Sobic001G025300--Sobic001G070800 Sobic007G197600 Sobic007G197600 Sobic009G159200--Sobic007G197600 Sobic007G177100 Sobic007G177100 Sobic009G159200--Sobic007G177100 Sobic009G159200--Sobic002G353800 Sobic009G159200--Sobic001G070800 Sobic006G157500 Sobic006G157500 Sobic009G159200--Sobic006G157500 Sobic009G159200--Sobic009G075900 Sobic003G379800 Sobic003G379800 Sobic009G159200--Sobic003G379800 Sobic003G393700 Sobic003G393700 Sobic009G159200--Sobic003G393700 Sobic009G159200--Sobic004G203700 Sobic003G087300--Sobic002G416600 Sobic010G052700 Sobic010G052700 Sobic003G087300--Sobic010G052700 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic002G125700 Sobic002G125700 Sobic003G087300--Sobic002G125700 Sobic003G087300--Sobic001G252300 Sobic003G297600 Sobic003G297600 Sobic001G070800--Sobic003G297600 Sobic001G070800--Sobic009G077800 Sobic001G070800--Sobic003G393700 Sobic001G070800--Sobic002G416600 Sobic009G139400 Sobic009G139400 Sobic001G070800--Sobic009G139400 Sobic001G177800 Sobic001G177800 Sobic001G070800--Sobic001G177800 Sobic001G070800--Sobic001G317200 Sobic001G070800--Sobic006G099900 Sobic001G070800--Sobic001G252300 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic009G145500 Sobic009G145500 Sobic006G154500--Sobic009G145500 Sobic006G154500--Sobic003G303100 Sobic004G161751 Sobic004G161751 Sobic006G154500--Sobic004G161751 Sobic003G043600 Sobic003G043600 Sobic006G154500--Sobic003G043600 Sobic001G401100 Sobic001G401100 Sobic006G154500--Sobic001G401100 Sobic010G175800 Sobic010G175800 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic006G154500--Sobic004G203700
Octagon: transcription factors


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