Gene annotation
Transcriptome id Sobic.006G241300.1
Synonym Sb06g030730
Functional annotation expressed protein
UniProt A0A1B6PNM6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g55600.1 : expressed protein
MaizeGDB (Corn) Zm00025a009538
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.005G026800 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
5 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
6 Sobic.002G254200 expressed protein -
7 Sobic.002G278300 thaumatin, putative, expressed -
8 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
9 Sobic.006G191600 expressed protein -
10 Sobic.001G516500 expansin precursor, putative, expressed -
11 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.008G106800 isoflavone reductase, putative, expressed -
13 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
14 Sobic.001G471900 C2 domain containing protein, putative, expressed -
15 Sobic.001G311000 expansin precursor, putative, expressed -
16 Sobic.010G154150 - -
17 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
18 Sobic.003G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -


Gene co-expression network
sample Sobic006G241300 Sobic006G241300 Sobic003G406900 Sobic003G406900 Sobic006G241300--Sobic003G406900 Sobic003G408200 Sobic003G408200 Sobic006G241300--Sobic003G408200 Sobic004G164500 Sobic004G164500 Sobic006G241300--Sobic004G164500 Sobic005G026800 Sobic005G026800 Sobic006G241300--Sobic005G026800 Sobic003G296600 Sobic003G296600 Sobic006G241300--Sobic003G296600 Sobic002G254200 Sobic002G254200 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic003G293900 Sobic003G293900 Sobic006G241300--Sobic003G293900 Sobic006G191600 Sobic006G191600 Sobic006G241300--Sobic006G191600 Sobic001G225200 Sobic001G225200 Sobic003G406900--Sobic001G225200 Sobic003G406900--Sobic006G191600 Sobic001G225300 Sobic001G225300 Sobic003G406900--Sobic001G225300 Sobic003G406900--Sobic006G241300 Sobic003G406900--Sobic002G254200 Sobic009G065000 Sobic009G065000 Sobic003G406900--Sobic009G065000 Sobic001G311000 Sobic001G311000 Sobic003G406900--Sobic001G311000 Sobic003G048000 Sobic003G048000 Sobic003G406900--Sobic003G048000 Sobic002G205300 Sobic002G205300 Sobic003G406900--Sobic002G205300 Sobic003G408200--Sobic006G241300 Sobic003G408200--Sobic003G296600 Sobic002G330700 Sobic002G330700 Sobic003G408200--Sobic002G330700 Sobic003G408200--Sobic005G026800 Sobic010G154150 Sobic010G154150 Sobic003G408200--Sobic010G154150 Sobic001G247400 Sobic001G247400 Sobic003G408200--Sobic001G247400 Sobic001G471900 Sobic001G471900 Sobic003G408200--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic003G408200--Sobic001G056700 Sobic004G157300 Sobic004G157300 Sobic003G408200--Sobic004G157300 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic004G164500--Sobic009G065000 Sobic008G106800 Sobic008G106800 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic006G257900 Sobic006G257900 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic005G026800--Sobic006G241300 Sobic003G208700 Sobic003G208700 Sobic005G026800--Sobic003G208700 Sobic007G068800 Sobic007G068800 Sobic005G026800--Sobic007G068800 Sobic005G026800--Sobic003G408200 Sobic007G063700 Sobic007G063700 Sobic005G026800--Sobic007G063700 Sobic005G026600 Sobic005G026600 Sobic005G026800--Sobic005G026600 Sobic005G110520 Sobic005G110520 Sobic005G026800--Sobic005G110520 Sobic006G019801 Sobic006G019801 Sobic005G026800--Sobic006G019801 Sobic003G201850 Sobic003G201850 Sobic005G026800--Sobic003G201850 Sobic001G032100 Sobic001G032100 Sobic003G296600--Sobic001G032100 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic004G221900 Sobic004G221900 Sobic003G296600--Sobic004G221900 Sobic001G225100 Sobic001G225100 Sobic003G296600--Sobic001G225100 Sobic006G194150 Sobic006G194150 Sobic003G296600--Sobic006G194150 Sobic002G246600 Sobic002G246600 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic006G184300 Sobic006G184300 Sobic003G296600--Sobic006G184300 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic006G269200 Sobic006G269200 Sobic002G254200--Sobic006G269200 Sobic006G154500 Sobic006G154500 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic006G157500 Sobic006G157500 Sobic002G254200--Sobic006G157500 Sobic007G126100 Sobic007G126100 Sobic002G254200--Sobic007G126100 Sobic003G436800 Sobic003G436800 Sobic002G278300--Sobic003G436800 Sobic009G055100 Sobic009G055100 Sobic002G278300--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G278300--Sobic009G040900 Sobic002G278300--Sobic009G159200 Sobic002G278300--Sobic001G056700 Sobic009G166700 Sobic009G166700 Sobic002G278300--Sobic009G166700 Sobic002G278300--Sobic007G177100 Sobic004G069200 Sobic004G069200 Sobic002G278300--Sobic004G069200 Sobic009G075900 Sobic009G075900 Sobic002G278300--Sobic009G075900 Sobic003G293900--Sobic003G296600 Sobic009G030100 Sobic009G030100 Sobic003G293900--Sobic009G030100 Sobic003G293900--Sobic001G032100 Sobic003G293900--Sobic006G194150 Sobic002G421600 Sobic002G421600 Sobic003G293900--Sobic002G421600 Sobic003G293900--Sobic001G247400 Sobic003G293900--Sobic002G330700 Sobic003G293900--Sobic001G311000 Sobic003G293900--Sobic007G126100 Sobic006G191600--Sobic002G254200 Sobic006G191600--Sobic001G225200 Sobic006G191600--Sobic003G406900 Sobic006G191600--Sobic001G311000 Sobic001G082400 Sobic001G082400 Sobic006G191600--Sobic001G082400 Sobic006G191600--Sobic003G048000 Sobic006G191600--Sobic006G157500 Sobic006G191600--Sobic004G164500 Sobic003G402300 Sobic003G402300 Sobic006G191600--Sobic003G402300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.