Gene annotation
Transcriptome id Sobic.005G026800.1
Synonym Sb05g002240
Functional annotation pentatricopeptide, putative, expressed
UniProt C5Y441
Pfam PF00300
Panther DB PTHR23029 PTHR23029:SF27
NCBI CDD KOG0235; Phosphoglycerate mutase
KEGG Orthology K15634; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50520 : Phosphoglycerate mutase family protein
RAP-DB (Rice) LOC_Os12g04110.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241300 expressed protein -
2 Sobic.003G208700 OsWAK90 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.007G068800 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
4 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G063700 - -
6 Sobic.005G026600 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
7 Sobic.005G110520 - -
8 Sobic.006G019801 - -
9 Sobic.003G201850 - -
10 Sobic.008G062601 - -
11 Sobic.003G281500 Plant PDR ABC transporter associated domain containing protein, expressed -
12 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
13 Sobic.010G028950 - -
14 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.003G418000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucoanthocyanidin dioxygenase, putative, expressed -
16 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
17 Sobic.001G225100 expressed protein -
18 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.010G121600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D


Gene co-expression network
sample Sobic005G026800 Sobic005G026800 Sobic006G241300 Sobic006G241300 Sobic005G026800--Sobic006G241300 Sobic003G208700 Sobic003G208700 Sobic005G026800--Sobic003G208700 Sobic007G068800 Sobic007G068800 Sobic005G026800--Sobic007G068800 Sobic003G408200 Sobic003G408200 Sobic005G026800--Sobic003G408200 Sobic007G063700 Sobic007G063700 Sobic005G026800--Sobic007G063700 Sobic005G026600 Sobic005G026600 Sobic005G026800--Sobic005G026600 Sobic005G110520 Sobic005G110520 Sobic005G026800--Sobic005G110520 Sobic006G019801 Sobic006G019801 Sobic005G026800--Sobic006G019801 Sobic003G201850 Sobic003G201850 Sobic005G026800--Sobic003G201850 Sobic003G406900 Sobic003G406900 Sobic006G241300--Sobic003G406900 Sobic006G241300--Sobic003G408200 Sobic004G164500 Sobic004G164500 Sobic006G241300--Sobic004G164500 Sobic006G241300--Sobic005G026800 Sobic003G296600 Sobic003G296600 Sobic006G241300--Sobic003G296600 Sobic002G254200 Sobic002G254200 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic003G293900 Sobic003G293900 Sobic006G241300--Sobic003G293900 Sobic006G191600 Sobic006G191600 Sobic006G241300--Sobic006G191600 Sobic008G002600 Sobic008G002600 Sobic003G208700--Sobic008G002600 Sobic010G028950 Sobic010G028950 Sobic003G208700--Sobic010G028950 Sobic003G208700--Sobic005G026800 Sobic010G160100 Sobic010G160100 Sobic003G208700--Sobic010G160100 Sobic008G009500 Sobic008G009500 Sobic003G208700--Sobic008G009500 Sobic004G195700 Sobic004G195700 Sobic003G208700--Sobic004G195700 Sobic005G212600 Sobic005G212600 Sobic003G208700--Sobic005G212600 Sobic008G108900 Sobic008G108900 Sobic003G208700--Sobic008G108900 Sobic010G144000 Sobic010G144000 Sobic003G208700--Sobic010G144000 Sobic003G000800 Sobic003G000800 Sobic007G068800--Sobic003G000800 Sobic001G138300 Sobic001G138300 Sobic007G068800--Sobic001G138300 Sobic007G203700 Sobic007G203700 Sobic007G068800--Sobic007G203700 Sobic001G073000 Sobic001G073000 Sobic007G068800--Sobic001G073000 Sobic009G246950 Sobic009G246950 Sobic007G068800--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic007G068800--Sobic004G079100 Sobic007G068800--Sobic005G026800 Sobic006G256500 Sobic006G256500 Sobic007G068800--Sobic006G256500 Sobic006G212100 Sobic006G212100 Sobic007G068800--Sobic006G212100 Sobic003G408200--Sobic006G241300 Sobic003G408200--Sobic003G296600 Sobic002G330700 Sobic002G330700 Sobic003G408200--Sobic002G330700 Sobic003G408200--Sobic005G026800 Sobic010G154150 Sobic010G154150 Sobic003G408200--Sobic010G154150 Sobic001G247400 Sobic001G247400 Sobic003G408200--Sobic001G247400 Sobic001G471900 Sobic001G471900 Sobic003G408200--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic003G408200--Sobic001G056700 Sobic004G157300 Sobic004G157300 Sobic003G408200--Sobic004G157300 Sobic007G063700--Sobic006G019801 Sobic006G268500 Sobic006G268500 Sobic007G063700--Sobic006G268500 Sobic009G071000 Sobic009G071000 Sobic007G063700--Sobic009G071000 Sobic008G140900 Sobic008G140900 Sobic007G063700--Sobic008G140900 Sobic002G369600 Sobic002G369600 Sobic007G063700--Sobic002G369600 Sobic006G227750 Sobic006G227750 Sobic007G063700--Sobic006G227750 Sobic009G157450 Sobic009G157450 Sobic007G063700--Sobic009G157450 Sobic006G234900 Sobic006G234900 Sobic007G063700--Sobic006G234900 Sobic001G225300 Sobic001G225300 Sobic007G063700--Sobic001G225300 Sobic001G282100 Sobic001G282100 Sobic005G026600--Sobic001G282100 Sobic003G107600 Sobic003G107600 Sobic005G026600--Sobic003G107600 Sobic010G182300 Sobic010G182300 Sobic005G026600--Sobic010G182300 Sobic002G258800 Sobic002G258800 Sobic005G026600--Sobic002G258800 Sobic007G008200 Sobic007G008200 Sobic005G026600--Sobic007G008200 Sobic009G033600 Sobic009G033600 Sobic005G026600--Sobic009G033600 Sobic004G066600 Sobic004G066600 Sobic005G026600--Sobic004G066600 Sobic002G155500 Sobic002G155500 Sobic005G026600--Sobic002G155500 Sobic003G280400 Sobic003G280400 Sobic005G026600--Sobic003G280400 Sobic002G229250 Sobic002G229250 Sobic005G110520--Sobic002G229250 Sobic002G171500 Sobic002G171500 Sobic005G110520--Sobic002G171500 Sobic005G110520--Sobic003G408200 Sobic006G124000 Sobic006G124000 Sobic005G110520--Sobic006G124000 Sobic005G110520--Sobic006G241300 Sobic004G016800 Sobic004G016800 Sobic005G110520--Sobic004G016800 Sobic001G225100 Sobic001G225100 Sobic005G110520--Sobic001G225100 Sobic005G110520--Sobic005G026800 Sobic005G110520--Sobic007G063700 Sobic006G019801--Sobic007G063700 Sobic006G019801--Sobic008G140900 Sobic006G019801--Sobic006G268500 Sobic009G197100 Sobic009G197100 Sobic006G019801--Sobic009G197100 Sobic006G019801--Sobic009G071000 Sobic006G019801--Sobic006G234900 Sobic006G019801--Sobic002G369600 Sobic001G062132 Sobic001G062132 Sobic006G019801--Sobic001G062132 Sobic006G019801--Sobic009G157450 Sobic010G148750 Sobic010G148750 Sobic003G201850--Sobic010G148750 Sobic005G043400 Sobic005G043400 Sobic003G201850--Sobic005G043400 Sobic003G201850--Sobic010G144000 Sobic009G101600 Sobic009G101600 Sobic003G201850--Sobic009G101600 Sobic004G152601 Sobic004G152601 Sobic003G201850--Sobic004G152601 Sobic004G200866 Sobic004G200866 Sobic003G201850--Sobic004G200866 Sobic005G142200 Sobic005G142200 Sobic003G201850--Sobic005G142200 SobicK010000 SobicK010000 Sobic003G201850--SobicK010000 Sobic008G045600 Sobic008G045600 Sobic003G201850--Sobic008G045600
Octagon: transcription factors


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