Gene annotation
Transcriptome id Sobic.008G062601.1
Synonym -
Functional annotation -
UniProt A0A1Z5R564
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G050100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
2 Sobic.003G280900 NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
3 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
4 Sobic.002G389301 - -
5 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
6 Sobic.007G195100 peptidase, T1 family, putative, expressed K02732: 20S proteasome subunit beta 6
7 Sobic.007G063700 - -
8 Sobic.003G418000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucoanthocyanidin dioxygenase, putative, expressed -
9 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.001G224700 expressed protein -
11 Sobic.003G275300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytidine/deoxycytidylate deaminase, putative, expressed K01489: cdd, cytidine deaminase
12 Sobic.005G026800 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
13 Sobic.007G068800 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
14 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
15 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
16 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
17 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
18 Sobic.010G075900 - -
19 Sobic.009G071000 HAD superfamily phosphatase, putative, expressed -
20 Sobic.006G214600 - -


Gene co-expression network
sample Sobic008G062601 Sobic008G062601 Sobic004G050100 Sobic004G050100 Sobic008G062601--Sobic004G050100 Sobic003G280900 Sobic003G280900 Sobic008G062601--Sobic003G280900 Sobic004G049900 Sobic004G049900 Sobic008G062601--Sobic004G049900 Sobic002G389301 Sobic002G389301 Sobic008G062601--Sobic002G389301 Sobic004G050000 Sobic004G050000 Sobic008G062601--Sobic004G050000 Sobic007G195100 Sobic007G195100 Sobic008G062601--Sobic007G195100 Sobic007G063700 Sobic007G063700 Sobic008G062601--Sobic007G063700 Sobic003G418000 Sobic003G418000 Sobic008G062601--Sobic003G418000 Sobic006G121500 Sobic006G121500 Sobic008G062601--Sobic006G121500 Sobic004G050100--Sobic008G062601 Sobic001G433400 Sobic001G433400 Sobic004G050100--Sobic001G433400 Sobic004G183501 Sobic004G183501 Sobic004G050100--Sobic004G183501 Sobic004G050100--Sobic003G280900 Sobic002G035900 Sobic002G035900 Sobic004G050100--Sobic002G035900 Sobic003G367451 Sobic003G367451 Sobic004G050100--Sobic003G367451 Sobic001G461900 Sobic001G461900 Sobic004G050100--Sobic001G461900 Sobic004G050100--Sobic004G049900 Sobic003G333400 Sobic003G333400 Sobic004G050100--Sobic003G333400 Sobic002G249000 Sobic002G249000 Sobic003G280900--Sobic002G249000 Sobic003G280900--Sobic003G333400 Sobic001G010400 Sobic001G010400 Sobic003G280900--Sobic001G010400 Sobic004G276100 Sobic004G276100 Sobic003G280900--Sobic004G276100 Sobic003G280900--Sobic004G050000 Sobic003G280900--Sobic007G195100 Sobic001G026900 Sobic001G026900 Sobic003G280900--Sobic001G026900 Sobic005G117400 Sobic005G117400 Sobic003G280900--Sobic005G117400 Sobic002G090200 Sobic002G090200 Sobic003G280900--Sobic002G090200 Sobic003G253000 Sobic003G253000 Sobic004G049900--Sobic003G253000 Sobic009G185800 Sobic009G185800 Sobic004G049900--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic004G049900--Sobic006G108400 Sobic003G130800 Sobic003G130800 Sobic004G049900--Sobic003G130800 Sobic001G459200 Sobic001G459200 Sobic004G049900--Sobic001G459200 Sobic004G049900--Sobic004G050000 Sobic001G415500 Sobic001G415500 Sobic004G049900--Sobic001G415500 Sobic002G267500 Sobic002G267500 Sobic004G049900--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G049900--Sobic001G281400 Sobic002G044800 Sobic002G044800 Sobic002G389301--Sobic002G044800 Sobic007G065800 Sobic007G065800 Sobic002G389301--Sobic007G065800 Sobic004G333150 Sobic004G333150 Sobic002G389301--Sobic004G333150 Sobic004G240600 Sobic004G240600 Sobic002G389301--Sobic004G240600 Sobic009G009700 Sobic009G009700 Sobic002G389301--Sobic009G009700 Sobic006G190700 Sobic006G190700 Sobic002G389301--Sobic006G190700 Sobic006G214600 Sobic006G214600 Sobic002G389301--Sobic006G214600 Sobic009G009600 Sobic009G009600 Sobic002G389301--Sobic009G009600 Sobic009G021900 Sobic009G021900 Sobic002G389301--Sobic009G021900 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic004G050000--Sobic002G267500 Sobic004G050000--Sobic006G121500 Sobic004G050000--Sobic002G090200 Sobic009G177800 Sobic009G177800 Sobic004G050000--Sobic009G177800 Sobic004G050000--Sobic006G108400 Sobic007G195100--Sobic003G333400 Sobic007G195100--Sobic003G367451 Sobic002G296300 Sobic002G296300 Sobic007G195100--Sobic002G296300 Sobic007G195100--Sobic004G050000 Sobic001G403700 Sobic001G403700 Sobic007G195100--Sobic001G403700 Sobic009G111600 Sobic009G111600 Sobic007G195100--Sobic009G111600 Sobic002G159300 Sobic002G159300 Sobic007G195100--Sobic002G159300 Sobic003G323600 Sobic003G323600 Sobic007G195100--Sobic003G323600 Sobic001G132100 Sobic001G132100 Sobic007G195100--Sobic001G132100 Sobic006G019801 Sobic006G019801 Sobic007G063700--Sobic006G019801 Sobic006G268500 Sobic006G268500 Sobic007G063700--Sobic006G268500 Sobic009G071000 Sobic009G071000 Sobic007G063700--Sobic009G071000 Sobic008G140900 Sobic008G140900 Sobic007G063700--Sobic008G140900 Sobic002G369600 Sobic002G369600 Sobic007G063700--Sobic002G369600 Sobic006G227750 Sobic006G227750 Sobic007G063700--Sobic006G227750 Sobic009G157450 Sobic009G157450 Sobic007G063700--Sobic009G157450 Sobic006G234900 Sobic006G234900 Sobic007G063700--Sobic006G234900 Sobic001G225300 Sobic001G225300 Sobic007G063700--Sobic001G225300 Sobic006G106800 Sobic006G106800 Sobic003G418000--Sobic006G106800 Sobic002G254200 Sobic002G254200 Sobic003G418000--Sobic002G254200 Sobic001G223100 Sobic001G223100 Sobic003G418000--Sobic001G223100 Sobic006G269200 Sobic006G269200 Sobic003G418000--Sobic006G269200 Sobic009G030100 Sobic009G030100 Sobic003G418000--Sobic009G030100 Sobic003G418000--Sobic001G415500 Sobic002G291300 Sobic002G291300 Sobic003G418000--Sobic002G291300 Sobic007G126100 Sobic007G126100 Sobic003G418000--Sobic007G126100 Sobic002G328300 Sobic002G328300 Sobic003G418000--Sobic002G328300 Sobic001G401100 Sobic001G401100 Sobic006G121500--Sobic001G401100 Sobic002G055600 Sobic002G055600 Sobic006G121500--Sobic002G055600 Sobic004G148200 Sobic004G148200 Sobic006G121500--Sobic004G148200 Sobic002G367400 Sobic002G367400 Sobic006G121500--Sobic002G367400 Sobic002G055700 Sobic002G055700 Sobic006G121500--Sobic002G055700 Sobic010G069200 Sobic010G069200 Sobic006G121500--Sobic010G069200 Sobic004G189500 Sobic004G189500 Sobic006G121500--Sobic004G189500 Sobic006G121500--Sobic004G050000 Sobic006G240600 Sobic006G240600 Sobic006G121500--Sobic006G240600
Octagon: transcription factors


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