Gene annotation
Transcriptome id Sobic.003G281500.1
Synonym PDR8, PEN3, Sb03g033300, ATPDR8, ABCG36, ATABCG36
Functional annotation Plant PDR ABC transporter associated domain containing protein, expressed
UniProt C5XIF0
Pfam PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF224
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G59870 : ABC-2 and Plant PDR ABC-type transporter family protein
RAP-DB (Rice) LOC_Os01g52560.1 : Plant PDR ABC transporter associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018240 , Zm00025a050308 , Zm00025a011522 , Zm00025a011523 , Zm00025a051059 , Zm00025a001616 , Zm00025a042316 , Zm00025a027732
Brachypodium KQJ93976 , PNT72752 , PNT72751 , KQK09541
Barley HORVU3Hr1G068750.28 , HORVU3Hr1G068750.29 , HORVU3Hr1G068750.26 , HORVU3Hr1G068750.27 , HORVU3Hr1G068750.24 , HORVU3Hr1G068750.25 , HORVU3Hr1G068750.22 , HORVU3Hr1G068750.23 , HORVU3Hr1G068750.20 , HORVU3Hr1G068750.21 , HORVU7Hr1G088630.15 , HORVU7Hr1G088630.8 , HORVU7Hr1G088630.3 , HORVU7Hr1G088630.1 , HORVU7Hr1G088630.7 , HORVU7Hr1G088630.5 , HORVU3Hr1G068750.9 , HORVU3Hr1G068750.8 , HORVU3Hr1G068750.7 , HORVU3Hr1G068750.6 , HORVU3Hr1G068750.5 , HORVU3Hr1G068750.4 , HORVU3Hr1G068750.3 , HORVU3Hr1G068750.2 , HORVU3Hr1G068750.1 , HORVU7Hr1G088630.13 , HORVU7Hr1G088630.16 , HORVU7Hr1G088600.3 , HORVU7Hr1G088600.2 , HORVU7Hr1G088600.1 , HORVU7Hr1G088600.5 , HORVU7Hr1G088600.4 , HORVU3Hr1G068750.17 , HORVU3Hr1G068750.16 , HORVU3Hr1G068750.15 , HORVU3Hr1G068750.14 , HORVU3Hr1G068750.13 , HORVU3Hr1G068750.12 , HORVU3Hr1G068750.11 , HORVU3Hr1G068750.10 , HORVU3Hr1G068750.19 , HORVU3Hr1G068750.18 , HORVU3Hr1G068750.38 , HORVU3Hr1G068750.31 , HORVU3Hr1G068750.33 , HORVU3Hr1G068750.32 , HORVU3Hr1G068750.35 , HORVU3Hr1G068750.34 , HORVU3Hr1G068750.37 , HORVU3Hr1G068750.36
Wheat TraesCS3D02G284900 , TraesCS7B02G271600 , TraesCS3A02G285100 , TraesCS3B02G319000 , TraesCS7D02G366600 , TraesCS7A02G356100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
2 Sobic.001G430800 GA17271-PA, putative, expressed -
3 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
4 Sobic.010G219100 protein kinase APK1B, chloroplast precursor, putative, expressed -
5 Sobic.005G026800 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
6 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
7 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
8 Sobic.010G251100 - K03257: translation initiation factor 4A
9 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
10 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
11 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
12 Sobic.002G380000 TRM112, putative, expressed K15448: TRM112, multifunctional methyltransferase subunit TRM112
13 Sobic.004G072800 expressed protein -
14 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
15 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
17 Sobic.002G129000 RING zinc finger protein, putative, expressed -
18 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
19 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.005G026600 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase


Gene co-expression network
sample Sobic003G281500 Sobic003G281500 Sobic003G350600 Sobic003G350600 Sobic003G281500--Sobic003G350600 Sobic001G430800 Sobic001G430800 Sobic003G281500--Sobic001G430800 Sobic004G224800 Sobic004G224800 Sobic003G281500--Sobic004G224800 Sobic010G219100 Sobic010G219100 Sobic003G281500--Sobic010G219100 Sobic005G026800 Sobic005G026800 Sobic003G281500--Sobic005G026800 Sobic001G294200 Sobic001G294200 Sobic003G281500--Sobic001G294200 Sobic001G067900 Sobic001G067900 Sobic003G281500--Sobic001G067900 Sobic010G251100 Sobic010G251100 Sobic003G281500--Sobic010G251100 Sobic004G332000 Sobic004G332000 Sobic003G281500--Sobic004G332000 Sobic004G072800 Sobic004G072800 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G007500 Sobic003G007500 Sobic003G350600--Sobic003G007500 Sobic008G142700 Sobic008G142700 Sobic003G350600--Sobic008G142700 Sobic003G226500 Sobic003G226500 Sobic003G350600--Sobic003G226500 Sobic001G427800 Sobic001G427800 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic003G350600--Sobic001G067900 Sobic002G129000 Sobic002G129000 Sobic001G430800--Sobic002G129000 Sobic001G430800--Sobic003G350600 Sobic001G138300 Sobic001G138300 Sobic001G430800--Sobic001G138300 Sobic009G050700 Sobic009G050700 Sobic001G430800--Sobic009G050700 Sobic006G194500 Sobic006G194500 Sobic001G430800--Sobic006G194500 Sobic004G059000 Sobic004G059000 Sobic001G430800--Sobic004G059000 Sobic001G430800--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G430800--Sobic006G263900 Sobic010G055500 Sobic010G055500 Sobic001G430800--Sobic010G055500 Sobic003G124800 Sobic003G124800 Sobic004G224800--Sobic003G124800 Sobic004G334800 Sobic004G334800 Sobic004G224800--Sobic004G334800 Sobic001G529000 Sobic001G529000 Sobic004G224800--Sobic001G529000 Sobic004G066800 Sobic004G066800 Sobic004G224800--Sobic004G066800 Sobic001G439600 Sobic001G439600 Sobic004G224800--Sobic001G439600 Sobic010G039800 Sobic010G039800 Sobic004G224800--Sobic010G039800 Sobic001G367000 Sobic001G367000 Sobic004G224800--Sobic001G367000 Sobic001G126200 Sobic001G126200 Sobic004G224800--Sobic001G126200 Sobic001G054200 Sobic001G054200 Sobic004G224800--Sobic001G054200 Sobic002G272600 Sobic002G272600 Sobic010G219100--Sobic002G272600 Sobic003G247900 Sobic003G247900 Sobic010G219100--Sobic003G247900 Sobic008G137600 Sobic008G137600 Sobic010G219100--Sobic008G137600 Sobic010G219100--Sobic002G129000 Sobic006G183000 Sobic006G183000 Sobic010G219100--Sobic006G183000 Sobic006G257001 Sobic006G257001 Sobic010G219100--Sobic006G257001 Sobic010G193800 Sobic010G193800 Sobic010G219100--Sobic010G193800 Sobic001G152000 Sobic001G152000 Sobic010G219100--Sobic001G152000 Sobic010G219100--Sobic009G050700 Sobic006G241300 Sobic006G241300 Sobic005G026800--Sobic006G241300 Sobic003G208700 Sobic003G208700 Sobic005G026800--Sobic003G208700 Sobic007G068800 Sobic007G068800 Sobic005G026800--Sobic007G068800 Sobic003G408200 Sobic003G408200 Sobic005G026800--Sobic003G408200 Sobic007G063700 Sobic007G063700 Sobic005G026800--Sobic007G063700 Sobic005G026600 Sobic005G026600 Sobic005G026800--Sobic005G026600 Sobic005G110520 Sobic005G110520 Sobic005G026800--Sobic005G110520 Sobic006G019801 Sobic006G019801 Sobic005G026800--Sobic006G019801 Sobic003G201850 Sobic003G201850 Sobic005G026800--Sobic003G201850 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500 Sobic001G226100 Sobic001G226100 Sobic010G251100--Sobic001G226100 Sobic001G402300 Sobic001G402300 Sobic010G251100--Sobic001G402300 Sobic010G251100--Sobic003G226500 Sobic010G251100--Sobic009G232400 Sobic007G205000 Sobic007G205000 Sobic010G251100--Sobic007G205000 Sobic008G004400 Sobic008G004400 Sobic010G251100--Sobic008G004400 Sobic006G278700 Sobic006G278700 Sobic010G251100--Sobic006G278700 Sobic010G012600 Sobic010G012600 Sobic010G251100--Sobic010G012600 Sobic010G251100--Sobic010G193800 Sobic002G119800 Sobic002G119800 Sobic004G332000--Sobic002G119800 Sobic006G213601 Sobic006G213601 Sobic004G332000--Sobic006G213601 Sobic001G262900 Sobic001G262900 Sobic004G332000--Sobic001G262900 Sobic001G072200 Sobic001G072200 Sobic004G332000--Sobic001G072200 Sobic003G374500 Sobic003G374500 Sobic004G332000--Sobic003G374500 Sobic006G255100 Sobic006G255100 Sobic004G332000--Sobic006G255100 Sobic004G152601 Sobic004G152601 Sobic004G332000--Sobic004G152601 Sobic007G136700 Sobic007G136700 Sobic004G332000--Sobic007G136700 Sobic002G067100 Sobic002G067100 Sobic004G332000--Sobic002G067100
Octagon: transcription factors


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