Gene annotation
Transcriptome id Sobic.001G294200.1
Synonym CKB4, Sb01g028740
Functional annotation casein kinase II subunit beta-4, putative, expressed
UniProt C5WRG0
Pfam PF01214
Panther DB PTHR11740 PTHR11740:SF5
NCBI CDD KOG3092; Casein kinase II, beta subunit
KEGG Orthology K03115; casein kinase II subunit beta
Gene Ontology GO:0005956; protein kinase CK2 complex


Orthologs (automatic annotation)
TAIR AT2G44680 : casein kinase II beta subunit 4
RAP-DB (Rice) LOC_Os10g41520.2 : casein kinase II subunit beta-4, putative, expressed
MaizeGDB (Corn) Zm00025a051906 , Zm00025a003412
Brachypodium KQJ97849
Barley HORVU1Hr1G055250.8 , HORVU1Hr1G055250.9 , HORVU1Hr1G055250.1 , HORVU1Hr1G055250.2 , HORVU1Hr1G055250.3 , HORVU1Hr1G055250.4 , HORVU1Hr1G055250.5 , HORVU1Hr1G055250.6 , HORVU1Hr1G055250.7 , HORVU1Hr1G055250.10 , HORVU1Hr1G055250.11
Wheat TraesCS1A02G215700 , TraesCSU02G007300 , TraesCS1B02G229200 , TraesCS1B02G229200
Populus -


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cDNA sequences
Sobic.001G294200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078800 PB1 domain containing protein, expressed -
2 Sobic.001G543300 dehydrogenase, putative, expressed -
3 Sobic.006G262900 expressed protein -
4 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
5 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.002G129000 RING zinc finger protein, putative, expressed -
7 Sobic.001G365800 glutathione peroxidase domain containing protein, expressed K00432: gpx, btuE, glutathione peroxidase
8 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
9 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
11 Sobic.009G149300 expressed protein -
12 Sobic.009G232400 expressed protein -
13 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
14 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
15 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
16 Sobic.010G091900 -(PubMedID : 26320239)@HVA22, putative, expressed -
17 Sobic.008G004400 GIL1, putative, expressed -
18 Sobic.003G291500 elongation factor, putative, expressed K03234: elongation factor 2
19 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
20 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11


Gene co-expression network
sample Sobic001G294200 Sobic001G294200 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic003G078800--Sobic001G294200 Sobic002G122600 Sobic002G122600 Sobic003G078800--Sobic002G122600 Sobic001G372000 Sobic001G372000 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G543300--Sobic001G294200 Sobic007G167700 Sobic007G167700 Sobic001G543300--Sobic007G167700 Sobic007G203700 Sobic007G203700 Sobic001G543300--Sobic007G203700 Sobic008G058300 Sobic008G058300 Sobic001G543300--Sobic008G058300 Sobic004G316900 Sobic004G316900 Sobic001G543300--Sobic004G316900 Sobic001G129300 Sobic001G129300 Sobic001G543300--Sobic001G129300 Sobic004G060600 Sobic004G060600 Sobic001G543300--Sobic004G060600 Sobic004G018800 Sobic004G018800 Sobic001G543300--Sobic004G018800 Sobic006G242300 Sobic006G242300 Sobic001G543300--Sobic006G242300 Sobic009G198500 Sobic009G198500 Sobic006G262900--Sobic009G198500 Sobic003G124800 Sobic003G124800 Sobic006G262900--Sobic003G124800 Sobic006G263900 Sobic006G263900 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic006G262900--Sobic001G054200 Sobic010G083700 Sobic010G083700 Sobic006G262900--Sobic010G083700 Sobic006G262900--Sobic001G129300 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic003G350600 Sobic003G350600 Sobic001G512600--Sobic003G350600 Sobic001G467000 Sobic001G467000 Sobic001G512600--Sobic001G467000 Sobic008G142700 Sobic008G142700 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic004G150400 Sobic004G150400 Sobic001G512600--Sobic004G150400 Sobic003G226500 Sobic003G226500 Sobic001G512600--Sobic003G226500 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G512600--Sobic001G372000 Sobic004G356900 Sobic004G356900 Sobic009G133400--Sobic004G356900 Sobic009G133400--Sobic006G242300 Sobic010G146600 Sobic010G146600 Sobic009G133400--Sobic010G146600 Sobic004G348100 Sobic004G348100 Sobic009G133400--Sobic004G348100 Sobic009G133400--Sobic004G301900 Sobic010G247400 Sobic010G247400 Sobic009G133400--Sobic010G247400 Sobic010G251100 Sobic010G251100 Sobic009G133400--Sobic010G251100 Sobic009G133400--Sobic001G512600 Sobic009G133400--Sobic007G203700 Sobic006G183000 Sobic006G183000 Sobic002G129000--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic002G129000--Sobic001G439600 Sobic009G050700 Sobic009G050700 Sobic002G129000--Sobic009G050700 Sobic001G294900 Sobic001G294900 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic002G129000--Sobic010G168600 Sobic002G129000--Sobic001G136900 Sobic002G129000--Sobic006G263900 Sobic003G405700 Sobic003G405700 Sobic002G129000--Sobic003G405700 Sobic002G352600 Sobic002G352600 Sobic001G365800--Sobic002G352600 Sobic007G007000 Sobic007G007000 Sobic001G365800--Sobic007G007000 Sobic009G149300 Sobic009G149300 Sobic001G365800--Sobic009G149300 Sobic003G010400 Sobic003G010400 Sobic001G365800--Sobic003G010400 Sobic001G530500 Sobic001G530500 Sobic001G365800--Sobic001G530500 Sobic006G119800 Sobic006G119800 Sobic001G365800--Sobic006G119800 Sobic001G365800--Sobic001G294200 Sobic010G000900 Sobic010G000900 Sobic001G365800--Sobic010G000900 Sobic006G194500 Sobic006G194500 Sobic001G365800--Sobic006G194500 Sobic010G090900 Sobic010G090900 Sobic004G301900--Sobic010G090900 Sobic004G301900--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic004G301900--Sobic002G113900 Sobic004G059000 Sobic004G059000 Sobic004G301900--Sobic004G059000 Sobic004G253000 Sobic004G253000 Sobic004G301900--Sobic004G253000 Sobic004G301900--Sobic001G512600 Sobic007G019800 Sobic007G019800 Sobic004G301900--Sobic007G019800 Sobic001G051200 Sobic001G051200 Sobic004G301900--Sobic001G051200 Sobic004G301900--Sobic004G356900 Sobic003G261400 Sobic003G261400 Sobic001G078800--Sobic003G261400 Sobic010G205300 Sobic010G205300 Sobic001G078800--Sobic010G205300 Sobic010G057900 Sobic010G057900 Sobic001G078800--Sobic010G057900 Sobic001G078800--Sobic002G400000 Sobic001G085100 Sobic001G085100 Sobic001G078800--Sobic001G085100 Sobic007G168600 Sobic007G168600 Sobic001G078800--Sobic007G168600 Sobic001G206900 Sobic001G206900 Sobic001G078800--Sobic001G206900 Sobic001G078800--Sobic001G051200 Sobic003G077900 Sobic003G077900 Sobic001G078800--Sobic003G077900
Octagon: transcription factors


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