Gene annotation
Transcriptome id Sobic.010G091900.1
Synonym ATHVA22A, HVA22A, Sb10g008020
Functional annotation - (PubMedID : 26320239)
HVA22, putative, expressed
UniProt C5Z726
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF52
NCBI CDD KOG1725; Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74520 : HVA22 homologue A
RAP-DB (Rice) LOC_Os06g12220.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a042592 , Zm00025a050366 , Zm00025a049481
Brachypodium KQK18879 , KQK18878
Barley HORVU6Hr1G075630.3 , HORVU6Hr1G075630.2 , HORVU6Hr1G075630.1 , HORVU6Hr1G075630.7 , HORVU6Hr1G075630.6 , HORVU6Hr1G075630.5 , HORVU6Hr1G075630.4 , HORVU7Hr1G038040.3 , HORVU7Hr1G038040.1
Wheat TraesCS6D02G285500 , TraesCS6B02G334800 , TraesCS6A02G306400
Populus -


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cDNA sequences
Sobic.010G091900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G212100 expressed protein -
2 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
3 Sobic.001G054200 green ripe-like, putative, expressed -
4 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
5 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
6 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
7 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
8 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
9 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
10 Sobic.006G262900 expressed protein -
11 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
12 Sobic.009G149300 expressed protein -
13 Sobic.010G205300 secreted salivary protein, putative, expressed -
14 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
15 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
17 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
18 Sobic.003G261400 DUF292 domain containing protein, expressed -
19 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
20 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6


Gene co-expression network
sample Sobic010G091900 Sobic010G091900 Sobic006G212100 Sobic006G212100 Sobic010G091900--Sobic006G212100 Sobic001G314500 Sobic001G314500 Sobic010G091900--Sobic001G314500 Sobic001G054200 Sobic001G054200 Sobic010G091900--Sobic001G054200 Sobic003G124800 Sobic003G124800 Sobic010G091900--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic010G091900--Sobic006G232200 Sobic001G501200 Sobic001G501200 Sobic010G091900--Sobic001G501200 Sobic007G168600 Sobic007G168600 Sobic010G091900--Sobic007G168600 Sobic009G198500 Sobic009G198500 Sobic010G091900--Sobic009G198500 Sobic001G005900 Sobic001G005900 Sobic010G091900--Sobic001G005900 Sobic006G212100--Sobic001G054200 Sobic006G212100--Sobic009G198500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic002G400000 Sobic002G400000 Sobic006G212100--Sobic002G400000 Sobic006G212100--Sobic007G168600 Sobic009G174900 Sobic009G174900 Sobic006G212100--Sobic009G174900 Sobic010G083700 Sobic010G083700 Sobic006G212100--Sobic010G083700 Sobic006G212100--Sobic001G005900 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic001G314500--Sobic006G232200 Sobic001G314500--Sobic001G054200 Sobic009G004600 Sobic009G004600 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic003G217400 Sobic003G217400 Sobic001G314500--Sobic003G217400 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic009G246950 Sobic009G246950 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic003G124800--Sobic006G232200 Sobic001G502200 Sobic001G502200 Sobic003G124800--Sobic001G502200 Sobic007G045600 Sobic007G045600 Sobic003G124800--Sobic007G045600 Sobic001G529000 Sobic001G529000 Sobic003G124800--Sobic001G529000 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic006G232200--Sobic003G124800 Sobic006G232200--Sobic007G045600 Sobic001G143300 Sobic001G143300 Sobic006G232200--Sobic001G143300 Sobic006G232200--Sobic009G198500 Sobic004G130100 Sobic004G130100 Sobic006G232200--Sobic004G130100 Sobic003G323600 Sobic003G323600 Sobic006G232200--Sobic003G323600 Sobic006G232200--Sobic001G054200 Sobic008G161800 Sobic008G161800 Sobic006G232200--Sobic008G161800 Sobic006G232200--Sobic001G388200 Sobic001G501200--Sobic009G198500 Sobic007G096700 Sobic007G096700 Sobic001G501200--Sobic007G096700 Sobic001G501200--Sobic001G005900 Sobic001G501200--Sobic007G168600 Sobic001G428100 Sobic001G428100 Sobic001G501200--Sobic001G428100 Sobic001G501200--Sobic003G124800 Sobic001G501200--Sobic001G502200 Sobic004G300900 Sobic004G300900 Sobic001G501200--Sobic004G300900 Sobic001G501200--Sobic004G130100 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic007G168600--Sobic001G502200 Sobic003G077900 Sobic003G077900 Sobic007G168600--Sobic003G077900 Sobic007G168600--Sobic010G205300 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic009G198500--Sobic007G096700 Sobic009G198500--Sobic006G212100 Sobic001G005900--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic001G005900--Sobic004G327300 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic001G005900--Sobic002G078400 Sobic001G005900--Sobic001G502200 Sobic004G130900 Sobic004G130900 Sobic001G005900--Sobic004G130900 Sobic001G005900--Sobic007G096700 Sobic001G005900--Sobic001G501200
Octagon: transcription factors


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