Gene annotation
Transcriptome id Sobic.001G543300.1
Synonym Sb01g050560
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1B6QR86
Pfam PF08240 PF00107
Panther DB PTHR11695 PTHR11695:SF578
NCBI CDD KOG1197; Predicted quinone oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G61510 : GroES-like zinc-binding alcohol dehydrogenase family protein
RAP-DB (Rice) LOC_Os03g01190.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a000098
Brachypodium KQK24154
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G543300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
2 Sobic.007G167700 expressed protein -
3 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
4 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
5 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
6 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
7 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
8 Sobic.004G018800 HVA22, putative, expressed -
9 Sobic.006G242300 - -
10 Sobic.006G262900 expressed protein -
11 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
12 Sobic.004G260400 expressed protein K07018: uncharacterized protein
13 Sobic.006G183000 RING zinc finger protein, putative, expressed -
14 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
15 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
16 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
18 Sobic.001G329300 expressed protein -
19 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
20 Sobic.001G078500 expressed protein -


Gene co-expression network
sample Sobic001G543300 Sobic001G543300 Sobic001G294200 Sobic001G294200 Sobic001G543300--Sobic001G294200 Sobic007G167700 Sobic007G167700 Sobic001G543300--Sobic007G167700 Sobic007G203700 Sobic007G203700 Sobic001G543300--Sobic007G203700 Sobic008G058300 Sobic008G058300 Sobic001G543300--Sobic008G058300 Sobic004G316900 Sobic004G316900 Sobic001G543300--Sobic004G316900 Sobic001G129300 Sobic001G129300 Sobic001G543300--Sobic001G129300 Sobic004G060600 Sobic004G060600 Sobic001G543300--Sobic004G060600 Sobic004G018800 Sobic004G018800 Sobic001G543300--Sobic004G018800 Sobic006G242300 Sobic006G242300 Sobic001G543300--Sobic006G242300 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic001G529000 Sobic001G529000 Sobic007G167700--Sobic001G529000 Sobic007G167700--Sobic007G203700 Sobic005G157200 Sobic005G157200 Sobic007G167700--Sobic005G157200 Sobic007G167700--Sobic008G058300 Sobic001G398600 Sobic001G398600 Sobic007G167700--Sobic001G398600 Sobic001G136900 Sobic001G136900 Sobic007G167700--Sobic001G136900 Sobic004G072800 Sobic004G072800 Sobic007G167700--Sobic004G072800 Sobic001G054200 Sobic001G054200 Sobic007G167700--Sobic001G054200 Sobic004G300900 Sobic004G300900 Sobic007G167700--Sobic004G300900 Sobic009G246950 Sobic009G246950 Sobic007G203700--Sobic009G246950 Sobic007G203700--Sobic001G529000 Sobic010G193800 Sobic010G193800 Sobic007G203700--Sobic010G193800 Sobic006G263900 Sobic006G263900 Sobic007G203700--Sobic006G263900 Sobic002G256300 Sobic002G256300 Sobic007G203700--Sobic002G256300 Sobic007G203700--Sobic004G300900 Sobic007G203700--Sobic001G054200 Sobic007G203700--Sobic004G060600 Sobic001G078500 Sobic001G078500 Sobic007G203700--Sobic001G078500 Sobic008G058300--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic008G058300--Sobic004G300900 Sobic010G029400 Sobic010G029400 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic001G377800 Sobic001G377800 Sobic008G058300--Sobic001G377800 Sobic004G316900--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic004G316900--Sobic002G204000 Sobic004G316900--Sobic002G256300 Sobic004G316900--Sobic001G529000 Sobic003G316850 Sobic003G316850 Sobic004G316900--Sobic003G316850 Sobic004G316900--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic004G316900--Sobic004G226800 Sobic004G316900--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic004G316900--Sobic001G439600 Sobic001G129300--Sobic001G136900 Sobic001G129300--Sobic006G262900 Sobic001G129300--Sobic001G543300 Sobic007G126200 Sobic007G126200 Sobic001G129300--Sobic007G126200 Sobic006G183000 Sobic006G183000 Sobic001G129300--Sobic006G183000 Sobic003G250500 Sobic003G250500 Sobic001G129300--Sobic003G250500 Sobic009G033900 Sobic009G033900 Sobic001G129300--Sobic009G033900 Sobic003G226500 Sobic003G226500 Sobic001G129300--Sobic003G226500 Sobic001G129300--Sobic007G167700 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic010G051500 Sobic010G051500 Sobic004G018800--Sobic010G051500 Sobic004G018800--Sobic007G203700 Sobic003G424800 Sobic003G424800 Sobic004G018800--Sobic003G424800 Sobic004G018800--Sobic010G193800 Sobic004G339200 Sobic004G339200 Sobic004G018800--Sobic004G339200 Sobic004G348900 Sobic004G348900 Sobic004G018800--Sobic004G348900 Sobic004G018800--Sobic004G316900 Sobic001G285300 Sobic001G285300 Sobic004G018800--Sobic001G285300 Sobic004G018800--Sobic001G543300 Sobic001G041200 Sobic001G041200 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G056600 Sobic006G056600 Sobic006G242300--Sobic006G056600 Sobic006G242300--Sobic009G133400 Sobic003G119400 Sobic003G119400 Sobic006G242300--Sobic003G119400 Sobic001G067900 Sobic001G067900 Sobic006G242300--Sobic001G067900 Sobic006G242300--Sobic009G033900 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100
Octagon: transcription factors


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