Gene annotation
Transcriptome id Sobic.007G167700.1
Synonym Sb07g024060
Functional annotation expressed protein
UniProt C5YN63
Pfam PF11595
Panther DB PTHR35741 PTHR35741:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61370 : Protein of unknown function (DUF3245)
RAP-DB (Rice) LOC_Os08g44540.1 : expressed protein
MaizeGDB (Corn) Zm00025a005592
Brachypodium KQK19862
Barley HORVU7Hr1G021990.4 , HORVU7Hr1G021990.1
Wheat TraesCS4A02G399500 , TraesCS7D02G094700 , TraesCS4A02G399800 , TraesCS3D02G431300 , TraesCS7A02G100400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
2 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
3 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
4 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
5 Sobic.001G398600 anaphase-promoting complex subunit 11, putative, expressed K03358: anaphase-promoting complex subunit 11
6 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
7 Sobic.004G072800 expressed protein -
8 Sobic.001G054200 green ripe-like, putative, expressed -
9 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
10 Sobic.001G543300 dehydrogenase, putative, expressed -
11 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
12 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
13 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
14 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
15 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
16 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
17 Sobic.008G132800 expressed protein -
18 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
19 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
20 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic007G167700 Sobic007G167700 Sobic001G529000 Sobic001G529000 Sobic007G167700--Sobic001G529000 Sobic007G203700 Sobic007G203700 Sobic007G167700--Sobic007G203700 Sobic005G157200 Sobic005G157200 Sobic007G167700--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic007G167700--Sobic008G058300 Sobic001G398600 Sobic001G398600 Sobic007G167700--Sobic001G398600 Sobic001G136900 Sobic001G136900 Sobic007G167700--Sobic001G136900 Sobic004G072800 Sobic004G072800 Sobic007G167700--Sobic004G072800 Sobic001G054200 Sobic001G054200 Sobic007G167700--Sobic001G054200 Sobic004G300900 Sobic004G300900 Sobic007G167700--Sobic004G300900 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic001G529000--Sobic007G203700 Sobic001G529000--Sobic004G300900 Sobic009G246950 Sobic009G246950 Sobic007G203700--Sobic009G246950 Sobic007G203700--Sobic001G529000 Sobic010G193800 Sobic010G193800 Sobic007G203700--Sobic010G193800 Sobic006G263900 Sobic006G263900 Sobic007G203700--Sobic006G263900 Sobic002G256300 Sobic002G256300 Sobic007G203700--Sobic002G256300 Sobic007G203700--Sobic004G300900 Sobic007G203700--Sobic001G054200 Sobic004G060600 Sobic004G060600 Sobic007G203700--Sobic004G060600 Sobic001G078500 Sobic001G078500 Sobic007G203700--Sobic001G078500 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic001G377800 Sobic001G377800 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic005G157200--Sobic002G406500 Sobic005G157200--Sobic007G163700 Sobic010G029400 Sobic010G029400 Sobic005G157200--Sobic010G029400 Sobic004G107600 Sobic004G107600 Sobic005G157200--Sobic004G107600 Sobic005G157200--Sobic001G529000 Sobic008G058300--Sobic005G157200 Sobic008G058300--Sobic003G025200 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic008G058300--Sobic004G300900 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800 Sobic005G111100 Sobic005G111100 Sobic001G398600--Sobic005G111100 Sobic001G532100 Sobic001G532100 Sobic001G398600--Sobic001G532100 Sobic001G398600--Sobic007G167700 Sobic002G044000 Sobic002G044000 Sobic001G398600--Sobic002G044000 Sobic009G212300 Sobic009G212300 Sobic001G398600--Sobic009G212300 Sobic006G016200 Sobic006G016200 Sobic001G398600--Sobic006G016200 Sobic007G152400 Sobic007G152400 Sobic001G398600--Sobic007G152400 Sobic001G126200 Sobic001G126200 Sobic001G398600--Sobic001G126200 Sobic004G012800 Sobic004G012800 Sobic001G398600--Sobic004G012800 Sobic001G439600 Sobic001G439600 Sobic001G136900--Sobic001G439600 Sobic001G136900--Sobic002G256300 Sobic004G316900 Sobic004G316900 Sobic001G136900--Sobic004G316900 Sobic010G083700 Sobic010G083700 Sobic001G136900--Sobic010G083700 Sobic001G136900--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G136900--Sobic002G129000 Sobic006G183000 Sobic006G183000 Sobic001G136900--Sobic006G183000 Sobic006G262900 Sobic006G262900 Sobic001G136900--Sobic006G262900 Sobic001G129300 Sobic001G129300 Sobic001G136900--Sobic001G129300 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic004G300900--Sobic002G078400 Sobic006G141500 Sobic006G141500 Sobic004G300900--Sobic006G141500 Sobic009G198500 Sobic009G198500 Sobic004G300900--Sobic009G198500 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic004G300900--Sobic008G058300 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800
Octagon: transcription factors


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