Gene annotation
Transcriptome id Sobic.001G398600.3,Sobic.001G398600.2
Synonym APC11, Sb01g037740
Functional annotation anaphase-promoting complex subunit 11, putative, expressed
UniProt A0A1B6QNN8
Pfam PF12861
Panther DB PTHR11210
NCBI CDD KOG1493; Anaphase-promoting complex (APC), subunit 11
KEGG Orthology K03358; anaphase-promoting complex subunit 11
Gene Ontology GO:0005680; anaphase-promoting complex GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT3G05870 : anaphase-promoting complex/cyclosome 11
RAP-DB (Rice) LOC_Os07g22840.1 : anaphase-promoting complex subunit 11, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G067100.1 , HORVU4Hr1G054480.9 , HORVU4Hr1G054480.7 , HORVU4Hr1G054480.6 , HORVU4Hr1G054480.5 , HORVU4Hr1G054480.11 , HORVU5Hr1G112840.2 , HORVU5Hr1G112840.1 , HORVU7Hr1G049040.1 , HORVU4Hr1G054480.8 , HORVU4Hr1G054480.3 , HORVU4Hr1G054480.4 , HORVU4Hr1G054480.10
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
2 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
3 Sobic.007G167700 expressed protein -
4 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
5 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
6 Sobic.006G016200 expressed protein -
7 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
8 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
9 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
10 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
11 Sobic.001G285300 expressed protein -
12 Sobic.004G265700 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
13 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
14 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
15 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
16 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
17 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1
18 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
19 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
20 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15


Gene co-expression network
sample Sobic001G398600 Sobic001G398600 Sobic005G111100 Sobic005G111100 Sobic001G398600--Sobic005G111100 Sobic001G532100 Sobic001G532100 Sobic001G398600--Sobic001G532100 Sobic007G167700 Sobic007G167700 Sobic001G398600--Sobic007G167700 Sobic002G044000 Sobic002G044000 Sobic001G398600--Sobic002G044000 Sobic009G212300 Sobic009G212300 Sobic001G398600--Sobic009G212300 Sobic006G016200 Sobic006G016200 Sobic001G398600--Sobic006G016200 Sobic007G152400 Sobic007G152400 Sobic001G398600--Sobic007G152400 Sobic001G126200 Sobic001G126200 Sobic001G398600--Sobic001G126200 Sobic004G012800 Sobic004G012800 Sobic001G398600--Sobic004G012800 Sobic001G128400 Sobic001G128400 Sobic005G111100--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic004G066800 Sobic004G066800 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic006G231700 Sobic006G231700 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic008G137600 Sobic008G137600 Sobic001G532100--Sobic008G137600 Sobic001G036700 Sobic001G036700 Sobic001G532100--Sobic001G036700 Sobic010G193800 Sobic010G193800 Sobic001G532100--Sobic010G193800 Sobic001G285300 Sobic001G285300 Sobic001G532100--Sobic001G285300 Sobic001G294900 Sobic001G294900 Sobic001G532100--Sobic001G294900 Sobic001G532100--Sobic007G152400 Sobic006G225300 Sobic006G225300 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic001G529000 Sobic001G529000 Sobic007G167700--Sobic001G529000 Sobic007G203700 Sobic007G203700 Sobic007G167700--Sobic007G203700 Sobic005G157200 Sobic005G157200 Sobic007G167700--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic007G167700--Sobic008G058300 Sobic007G167700--Sobic001G398600 Sobic001G136900 Sobic001G136900 Sobic007G167700--Sobic001G136900 Sobic004G072800 Sobic004G072800 Sobic007G167700--Sobic004G072800 Sobic001G054200 Sobic001G054200 Sobic007G167700--Sobic001G054200 Sobic004G300900 Sobic004G300900 Sobic007G167700--Sobic004G300900 Sobic009G201800 Sobic009G201800 Sobic002G044000--Sobic009G201800 Sobic003G358300 Sobic003G358300 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic002G044000--Sobic004G032000 Sobic002G044000--Sobic001G126200 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic009G234400 Sobic009G234400 Sobic009G212300--Sobic009G234400 Sobic003G196800 Sobic003G196800 Sobic009G212300--Sobic003G196800 Sobic001G096100 Sobic001G096100 Sobic009G212300--Sobic001G096100 Sobic006G231500 Sobic006G231500 Sobic009G212300--Sobic006G231500 Sobic003G308000 Sobic003G308000 Sobic009G212300--Sobic003G308000 Sobic001G404100 Sobic001G404100 Sobic009G212300--Sobic001G404100 Sobic007G217400 Sobic007G217400 Sobic009G212300--Sobic007G217400 Sobic001G481700 Sobic001G481700 Sobic009G212300--Sobic001G481700 Sobic006G211800 Sobic006G211800 Sobic009G212300--Sobic006G211800 Sobic006G016200--Sobic002G218000 Sobic006G016200--Sobic005G111100 Sobic002G373800 Sobic002G373800 Sobic006G016200--Sobic002G373800 Sobic009G016201 Sobic009G016201 Sobic006G016200--Sobic009G016201 Sobic005G011400 Sobic005G011400 Sobic006G016200--Sobic005G011400 Sobic010G243200 Sobic010G243200 Sobic006G016200--Sobic010G243200 Sobic006G016200--Sobic001G398600 Sobic009G036900 Sobic009G036900 Sobic006G016200--Sobic009G036900 Sobic010G150575 Sobic010G150575 Sobic006G016200--Sobic010G150575 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic002G428200 Sobic002G428200 Sobic007G152400--Sobic002G428200 Sobic002G257400 Sobic002G257400 Sobic007G152400--Sobic002G257400 Sobic007G152400--Sobic001G128400 Sobic007G152400--Sobic001G481700 Sobic007G152400--Sobic008G137600 Sobic004G204800 Sobic004G204800 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic006G222400 Sobic006G222400 Sobic001G126200--Sobic006G222400 Sobic004G224800 Sobic004G224800 Sobic001G126200--Sobic004G224800 Sobic006G094600 Sobic006G094600 Sobic001G126200--Sobic006G094600 Sobic003G131300 Sobic003G131300 Sobic001G126200--Sobic003G131300 Sobic001G126200--Sobic001G285300 Sobic010G238700 Sobic010G238700 Sobic001G126200--Sobic010G238700 Sobic001G367000 Sobic001G367000 Sobic001G126200--Sobic001G367000 Sobic001G126200--Sobic002G044000 Sobic007G192100 Sobic007G192100 Sobic001G126200--Sobic007G192100 Sobic004G137900 Sobic004G137900 Sobic004G012800--Sobic004G137900 Sobic004G012800--Sobic006G231500 Sobic004G012800--Sobic006G231700 Sobic009G001900 Sobic009G001900 Sobic004G012800--Sobic009G001900 Sobic002G254650 Sobic002G254650 Sobic004G012800--Sobic002G254650 Sobic004G012800--Sobic005G111100 Sobic004G012800--Sobic003G358300 Sobic004G012800--Sobic006G094600 Sobic004G012800--Sobic001G532100
Octagon: transcription factors


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