Gene annotation
Transcriptome id Sobic.004G060600.1
Synonym Sb04g005080
Functional annotation expressed protein
UniProt C5XW77
Pfam PF10253
Panther DB PTHR13621
NCBI CDD KOG3903; Mitotic checkpoint protein PRCC
KEGG Orthology K13105; proline-rich protein PRCC
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19270 : -
RAP-DB (Rice) LOC_Os02g07920.1 : expressed protein
MaizeGDB (Corn) Zm00025a019142 , Zm00025a034765
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G060600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
2 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
6 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
7 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
8 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4
9 Sobic.001G364600 transmembrane protein 85, putative, expressed -
10 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
11 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
12 Sobic.002G035900 glycine-rich protein, putative, expressed K13344: peroxin-13
13 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
14 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
15 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
16 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
17 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
18 Sobic.004G348900 expressed protein -
19 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
20 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -


Gene co-expression network
sample Sobic004G060600 Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic003G077900--Sobic002G400000 Sobic003G077900--Sobic007G168600 Sobic003G217400 Sobic003G217400 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic004G348900 Sobic004G348900 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic004G130900 Sobic004G130900 Sobic003G077900--Sobic004G130900 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic006G281200 Sobic006G281200 Sobic009G131100--Sobic006G281200 Sobic001G428100--Sobic006G281200 Sobic001G502200 Sobic001G502200 Sobic001G428100--Sobic001G502200 Sobic001G501200 Sobic001G501200 Sobic001G428100--Sobic001G501200 Sobic001G428100--Sobic004G060600 Sobic001G428100--Sobic009G198500 Sobic001G428100--Sobic009G004600 Sobic003G440800 Sobic003G440800 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic001G428100--Sobic003G117300 Sobic009G246950 Sobic009G246950 Sobic007G203700--Sobic009G246950 Sobic001G529000 Sobic001G529000 Sobic007G203700--Sobic001G529000 Sobic010G193800 Sobic010G193800 Sobic007G203700--Sobic010G193800 Sobic006G263900 Sobic006G263900 Sobic007G203700--Sobic006G263900 Sobic002G256300 Sobic002G256300 Sobic007G203700--Sobic002G256300 Sobic004G300900 Sobic004G300900 Sobic007G203700--Sobic004G300900 Sobic001G054200 Sobic001G054200 Sobic007G203700--Sobic001G054200 Sobic007G203700--Sobic004G060600 Sobic001G078500 Sobic001G078500 Sobic007G203700--Sobic001G078500 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic007G168600--Sobic001G502200 Sobic007G168600--Sobic003G077900 Sobic010G205300 Sobic010G205300 Sobic007G168600--Sobic010G205300 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic001G314500 Sobic001G314500 Sobic007G168600--Sobic001G314500 Sobic003G117300--Sobic004G060600 Sobic003G117300--Sobic001G428100 Sobic002G071000 Sobic002G071000 Sobic003G117300--Sobic002G071000 Sobic001G404100 Sobic001G404100 Sobic003G117300--Sobic001G404100 Sobic002G262000 Sobic002G262000 Sobic003G117300--Sobic002G262000 Sobic003G117300--Sobic001G501200 Sobic009G130400 Sobic009G130400 Sobic003G117300--Sobic009G130400 Sobic003G117300--Sobic006G281200 Sobic003G117300--Sobic003G077900 Sobic010G277100 Sobic010G277100 Sobic001G364600--Sobic010G277100 Sobic001G364600--Sobic007G168600 Sobic001G364600--Sobic004G060600 Sobic001G364600--Sobic003G077900 Sobic001G364600--Sobic002G400000 Sobic003G050600 Sobic003G050600 Sobic001G364600--Sobic003G050600 Sobic003G127300 Sobic003G127300 Sobic001G364600--Sobic003G127300 Sobic001G364600--Sobic009G004600 Sobic001G364600--Sobic001G314500
Octagon: transcription factors


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