Gene annotation
Transcriptome id Sobic.001G447900.1
Synonym Sb01g042080
Functional annotation OsFBO13 - F-box and other domain containing protein, expressed
UniProt C5WRR8
Pfam PF12937
Panther DB PTHR15537 PTHR15537:SF2
NCBI CDD -
KEGG Orthology K10293; F-box protein 7
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G23780 : F-box family protein
RAP-DB (Rice) LOC_Os03g12940.3 : OsFBO13 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001404
Brachypodium PNT77825
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
2 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
3 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
4 Sobic.006G212100 expressed protein -
5 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.001G175800 expressed protein -
7 Sobic.006G262900 expressed protein -
8 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
9 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
10 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
11 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
12 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
13 Sobic.003G127300 expressed protein -
14 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
15 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.002G159500 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
18 Sobic.003G277000 expressed protein -
19 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
20 Sobic.001G364600 transmembrane protein 85, putative, expressed -


Gene co-expression network
sample Sobic001G447900 Sobic001G447900 Sobic004G060600 Sobic004G060600 Sobic001G447900--Sobic004G060600 Sobic001G428100 Sobic001G428100 Sobic001G447900--Sobic001G428100 Sobic009G198500 Sobic009G198500 Sobic001G447900--Sobic009G198500 Sobic006G212100 Sobic006G212100 Sobic001G447900--Sobic006G212100 Sobic002G400000 Sobic002G400000 Sobic001G447900--Sobic002G400000 Sobic001G175800 Sobic001G175800 Sobic001G447900--Sobic001G175800 Sobic006G262900 Sobic006G262900 Sobic001G447900--Sobic006G262900 Sobic006G109700 Sobic006G109700 Sobic001G447900--Sobic006G109700 Sobic007G168600 Sobic007G168600 Sobic001G447900--Sobic007G168600 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic004G060600--Sobic009G198500 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic006G281200 Sobic006G281200 Sobic001G428100--Sobic006G281200 Sobic001G502200 Sobic001G502200 Sobic001G428100--Sobic001G502200 Sobic001G501200 Sobic001G501200 Sobic001G428100--Sobic001G501200 Sobic001G428100--Sobic004G060600 Sobic001G428100--Sobic009G198500 Sobic009G004600 Sobic009G004600 Sobic001G428100--Sobic009G004600 Sobic003G440800 Sobic003G440800 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic001G428100--Sobic003G117300 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic009G198500--Sobic002G078400 Sobic004G300900 Sobic004G300900 Sobic009G198500--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic009G198500--Sobic006G212100 Sobic001G054200 Sobic001G054200 Sobic006G212100--Sobic001G054200 Sobic006G212100--Sobic009G198500 Sobic001G314500 Sobic001G314500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic006G212100--Sobic002G400000 Sobic006G212100--Sobic007G168600 Sobic009G174900 Sobic009G174900 Sobic006G212100--Sobic009G174900 Sobic010G083700 Sobic010G083700 Sobic006G212100--Sobic010G083700 Sobic006G212100--Sobic001G005900 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic001G175800--Sobic007G096700 Sobic001G175800--Sobic009G198500 Sobic001G175800--Sobic001G314500 Sobic001G175800--Sobic009G004600 Sobic001G175800--Sobic002G400000 Sobic003G217400 Sobic003G217400 Sobic001G175800--Sobic003G217400 Sobic001G175800--Sobic006G212100 Sobic001G175800--Sobic010G083700 Sobic001G175800--Sobic004G272300 Sobic006G262900--Sobic009G198500 Sobic006G262900--Sobic003G124800 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic006G262900--Sobic001G054200 Sobic006G262900--Sobic010G083700 Sobic001G129300 Sobic001G129300 Sobic006G262900--Sobic001G129300 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G183000 Sobic006G183000 Sobic006G109700--Sobic006G183000 Sobic001G294900 Sobic001G294900 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic006G109700--Sobic001G502200 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic007G168600--Sobic001G502200 Sobic007G168600--Sobic003G077900 Sobic010G205300 Sobic010G205300 Sobic007G168600--Sobic010G205300 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500
Octagon: transcription factors


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