Gene annotation
Transcriptome id Sobic.002G159500.1
Synonym UEV1C, Sb02g020340, MMZ3
Functional annotation ubiquitin-conjugating enzyme, putative, expressed
UniProt C5X8W7
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF126
NCBI CDD KOG0896; Ubiquitin-conjugating enzyme E2
KEGG Orthology K10704; ubiquitin-conjugating enzyme E2 variant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36060 : MMS ZWEI homologue 3
RAP-DB (Rice) LOC_Os09g12570.1 : ubiquitin-conjugating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a034339 , Zm00025a046337
Brachypodium KQJ89754
Barley HORVU5Hr1G054080.2 , HORVU5Hr1G054080.1
Wheat TraesCS5A02G177900 , TraesCS5A02G177900 , TraesCS5A02G177900 , TraesCS5A02G177900 , TraesCS5A02G177900 , TraesCS5B02G175500 , TraesCS5D02G182300
Populus -


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cDNA sequences
Sobic.002G159500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G189000 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
2 Sobic.002G376500 OsCML8 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
3 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
4 Sobic.003G104700 Rer1 protein, putative, expressed -
5 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
6 Sobic.002G196350 - K14011: UBXN6, UBX domain-containing protein 6
7 Sobic.006G141500 expressed protein -
8 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
9 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
10 Sobic.001G233532 - K10576: UBE2H, ubiquitin-conjugating enzyme E2 H
11 Sobic.001G408900 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed -
12 Sobic.001G459200 MYB family transcription factor, putative, expressed -
13 Sobic.002G084500 expressed protein -
14 Sobic.009G122100 tetratricopeptide repeat containing protein, putative, expressed K17969: FIS1, TTC11, mitochondrial fission 1 protein
15 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
16 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
17 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
18 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
19 Sobic.001G132100 expressed protein -
20 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -


Gene co-expression network
sample Sobic002G159500 Sobic002G159500 Sobic003G189000 Sobic003G189000 Sobic002G159500--Sobic003G189000 Sobic002G376500 Sobic002G376500 Sobic002G159500--Sobic002G376500 Sobic002G222900 Sobic002G222900 Sobic002G159500--Sobic002G222900 Sobic003G104700 Sobic003G104700 Sobic002G159500--Sobic003G104700 Sobic004G130100 Sobic004G130100 Sobic002G159500--Sobic004G130100 Sobic002G196350 Sobic002G196350 Sobic002G159500--Sobic002G196350 Sobic006G141500 Sobic006G141500 Sobic002G159500--Sobic006G141500 Sobic007G096700 Sobic007G096700 Sobic002G159500--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic002G159500--Sobic001G501200 Sobic003G189000--Sobic002G159500 Sobic002G084500 Sobic002G084500 Sobic003G189000--Sobic002G084500 Sobic009G164500 Sobic009G164500 Sobic003G189000--Sobic009G164500 Sobic010G121300 Sobic010G121300 Sobic003G189000--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic003G189000--Sobic004G339200 Sobic009G146100 Sobic009G146100 Sobic003G189000--Sobic009G146100 Sobic001G233532 Sobic001G233532 Sobic003G189000--Sobic001G233532 Sobic001G408900 Sobic001G408900 Sobic003G189000--Sobic001G408900 Sobic008G097401 Sobic008G097401 Sobic003G189000--Sobic008G097401 Sobic003G362400 Sobic003G362400 Sobic002G376500--Sobic003G362400 Sobic010G042800 Sobic010G042800 Sobic002G376500--Sobic010G042800 Sobic001G529000 Sobic001G529000 Sobic002G376500--Sobic001G529000 Sobic010G210000 Sobic010G210000 Sobic002G376500--Sobic010G210000 Sobic001G309500 Sobic001G309500 Sobic002G376500--Sobic001G309500 Sobic002G376500--Sobic006G141500 Sobic002G218000 Sobic002G218000 Sobic002G376500--Sobic002G218000 Sobic002G376500--Sobic002G159500 Sobic010G153100 Sobic010G153100 Sobic002G376500--Sobic010G153100 Sobic003G155400 Sobic003G155400 Sobic002G222900--Sobic003G155400 Sobic001G224400 Sobic001G224400 Sobic002G222900--Sobic001G224400 Sobic007G134000 Sobic007G134000 Sobic002G222900--Sobic007G134000 Sobic010G154700 Sobic010G154700 Sobic002G222900--Sobic010G154700 Sobic007G068000 Sobic007G068000 Sobic002G222900--Sobic007G068000 Sobic010G225300 Sobic010G225300 Sobic002G222900--Sobic010G225300 Sobic001G459200 Sobic001G459200 Sobic002G222900--Sobic001G459200 Sobic001G128400 Sobic001G128400 Sobic002G222900--Sobic001G128400 Sobic007G051000 Sobic007G051000 Sobic002G222900--Sobic007G051000 Sobic002G428200 Sobic002G428200 Sobic003G104700--Sobic002G428200 Sobic006G252200 Sobic006G252200 Sobic003G104700--Sobic006G252200 Sobic007G076300 Sobic007G076300 Sobic003G104700--Sobic007G076300 Sobic002G078400 Sobic002G078400 Sobic003G104700--Sobic002G078400 Sobic003G367451 Sobic003G367451 Sobic003G104700--Sobic003G367451 Sobic007G091000 Sobic007G091000 Sobic003G104700--Sobic007G091000 Sobic001G236300 Sobic001G236300 Sobic003G104700--Sobic001G236300 Sobic004G224900 Sobic004G224900 Sobic003G104700--Sobic004G224900 Sobic004G335000 Sobic004G335000 Sobic003G104700--Sobic004G335000 Sobic009G217900 Sobic009G217900 Sobic004G130100--Sobic009G217900 Sobic006G232200 Sobic006G232200 Sobic004G130100--Sobic006G232200 Sobic004G130100--Sobic001G501200 Sobic003G337000 Sobic003G337000 Sobic004G130100--Sobic003G337000 Sobic002G363100 Sobic002G363100 Sobic004G130100--Sobic002G363100 Sobic003G124800 Sobic003G124800 Sobic004G130100--Sobic003G124800 Sobic009G198500 Sobic009G198500 Sobic004G130100--Sobic009G198500 Sobic004G130100--Sobic002G428200 Sobic001G428100 Sobic001G428100 Sobic004G130100--Sobic001G428100 Sobic010G213400 Sobic010G213400 Sobic002G196350--Sobic010G213400 Sobic006G062800 Sobic006G062800 Sobic002G196350--Sobic006G062800 Sobic004G026200 Sobic004G026200 Sobic002G196350--Sobic004G026200 Sobic003G063200 Sobic003G063200 Sobic002G196350--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic002G196350--Sobic005G028700 Sobic008G185400 Sobic008G185400 Sobic002G196350--Sobic008G185400 Sobic009G129000 Sobic009G129000 Sobic002G196350--Sobic009G129000 Sobic002G046100 Sobic002G046100 Sobic002G196350--Sobic002G046100 Sobic009G033700 Sobic009G033700 Sobic002G196350--Sobic009G033700 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic006G141500--Sobic002G046100 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic009G122100 Sobic009G122100 Sobic007G096700--Sobic009G122100 Sobic007G096700--Sobic001G501200 Sobic001G005900 Sobic001G005900 Sobic007G096700--Sobic001G005900 Sobic002G400000 Sobic002G400000 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic001G175800 Sobic001G175800 Sobic007G096700--Sobic001G175800 Sobic007G096700--Sobic004G300900 Sobic001G501200--Sobic009G198500 Sobic001G501200--Sobic007G096700 Sobic001G501200--Sobic001G005900 Sobic007G168600 Sobic007G168600 Sobic001G501200--Sobic007G168600 Sobic001G501200--Sobic001G428100 Sobic001G501200--Sobic003G124800 Sobic001G502200 Sobic001G502200 Sobic001G501200--Sobic001G502200 Sobic001G501200--Sobic004G300900 Sobic001G501200--Sobic004G130100
Octagon: transcription factors


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