Gene annotation
Transcriptome id Sobic.002G376500.1,Sobic.002G376500.2
Synonym Sb02g039410, CEN1, CEN2, ATCEN2
Functional annotation OsCML8 - Calmodulin-related calcium sensor protein, expressed
UniProt C6JRX0 , A0A109NDH9 , A0A1B6QFM7 , A0A1B6QFK7
Pfam PF13499
Panther DB PTHR23050 PTHR23050:SF167
NCBI CDD KOG0028; Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50360 : centrin2
RAP-DB (Rice) LOC_Os10g25010.1 : OsCML8 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a048772
Brachypodium KQK15160
Barley HORVU2Hr1G030640.1 , HORVU2Hr1G030640.2
Wheat TraesCS2A02G166500 , TraesCS2B02G192400 , TraesCS2D02G173900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
2 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
3 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
4 Sobic.010G210000 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
5 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
6 Sobic.006G141500 expressed protein -
7 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
8 Sobic.002G159500 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
9 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
10 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
11 Sobic.008G073300 clathrin adaptor complex small chain domain containing protein, expressed K11827: AP-2 complex subunit sigma-1
12 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
13 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
14 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
15 Sobic.001G433700 chorismate synthase 2, chloroplast precursor, putative, expressed K01736: chorismate synthase
16 Sobic.004G310900 emp24/gp25L/p24 family protein, putative, expressed -
17 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
18 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
19 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
20 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A


Gene co-expression network
sample Sobic002G376500 Sobic002G376500 Sobic003G362400 Sobic003G362400 Sobic002G376500--Sobic003G362400 Sobic010G042800 Sobic010G042800 Sobic002G376500--Sobic010G042800 Sobic001G529000 Sobic001G529000 Sobic002G376500--Sobic001G529000 Sobic010G210000 Sobic010G210000 Sobic002G376500--Sobic010G210000 Sobic001G309500 Sobic001G309500 Sobic002G376500--Sobic001G309500 Sobic006G141500 Sobic006G141500 Sobic002G376500--Sobic006G141500 Sobic002G218000 Sobic002G218000 Sobic002G376500--Sobic002G218000 Sobic002G159500 Sobic002G159500 Sobic002G376500--Sobic002G159500 Sobic010G153100 Sobic010G153100 Sobic002G376500--Sobic010G153100 Sobic002G078400 Sobic002G078400 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic001G331900 Sobic001G331900 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic004G310900 Sobic004G310900 Sobic010G042800--Sobic004G310900 Sobic002G263800 Sobic002G263800 Sobic010G042800--Sobic002G263800 Sobic005G157200 Sobic005G157200 Sobic010G042800--Sobic005G157200 Sobic002G406500 Sobic002G406500 Sobic010G042800--Sobic002G406500 Sobic004G066800 Sobic004G066800 Sobic010G042800--Sobic004G066800 Sobic004G032000 Sobic004G032000 Sobic010G042800--Sobic004G032000 Sobic010G042800--Sobic001G331900 Sobic003G129800 Sobic003G129800 Sobic010G042800--Sobic003G129800 Sobic001G128400 Sobic001G128400 Sobic010G042800--Sobic001G128400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic003G018600 Sobic003G018600 Sobic010G210000--Sobic003G018600 Sobic010G210000--Sobic002G376500 Sobic006G115000 Sobic006G115000 Sobic010G210000--Sobic006G115000 Sobic010G210000--Sobic003G362400 Sobic009G012700 Sobic009G012700 Sobic010G210000--Sobic009G012700 Sobic009G050200 Sobic009G050200 Sobic010G210000--Sobic009G050200 Sobic003G073900 Sobic003G073900 Sobic010G210000--Sobic003G073900 Sobic001G018800 Sobic001G018800 Sobic010G210000--Sobic001G018800 Sobic004G062400 Sobic004G062400 Sobic010G210000--Sobic004G062400 Sobic004G196300 Sobic004G196300 Sobic001G309500--Sobic004G196300 Sobic001G309500--Sobic010G153100 Sobic001G309500--Sobic002G078400 Sobic003G217100 Sobic003G217100 Sobic001G309500--Sobic003G217100 Sobic001G526100 Sobic001G526100 Sobic001G309500--Sobic001G526100 Sobic002G090700 Sobic002G090700 Sobic001G309500--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic001G309500--Sobic008G132800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic009G180000 Sobic009G180000 Sobic002G218000--Sobic009G180000 Sobic002G218000--Sobic006G141500 Sobic003G249800 Sobic003G249800 Sobic002G218000--Sobic003G249800 Sobic010G204500 Sobic010G204500 Sobic002G218000--Sobic010G204500 Sobic002G218000--Sobic005G111100 Sobic001G066700 Sobic001G066700 Sobic002G218000--Sobic001G066700 Sobic010G106200 Sobic010G106200 Sobic002G218000--Sobic010G106200 Sobic002G218000--Sobic010G243200 Sobic002G330000 Sobic002G330000 Sobic002G218000--Sobic002G330000 Sobic003G189000 Sobic003G189000 Sobic002G159500--Sobic003G189000 Sobic002G159500--Sobic002G376500 Sobic002G222900 Sobic002G222900 Sobic002G159500--Sobic002G222900 Sobic003G104700 Sobic003G104700 Sobic002G159500--Sobic003G104700 Sobic004G130100 Sobic004G130100 Sobic002G159500--Sobic004G130100 Sobic002G196350 Sobic002G196350 Sobic002G159500--Sobic002G196350 Sobic002G159500--Sobic006G141500 Sobic007G096700 Sobic007G096700 Sobic002G159500--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic002G159500--Sobic001G501200 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic010G153100--Sobic006G141500
Octagon: transcription factors


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