Gene annotation
Transcriptome id Sobic.009G191600.1
Synonym Sb09g025040, SOL1
Functional annotation tesmin/TSO1-like CXC domain containing protein, expressed
UniProt C5Z0T2
Pfam PF03638
Panther DB PTHR12446 PTHR12446:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22760 : Tesmin/TSO1-like CXC domain-containing protein
RAP-DB (Rice) LOC_Os05g43380.1 : tesmin/TSO1-like CXC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044176 , Zm00025a037904
Brachypodium -
Barley HORVU1Hr1G078000.10 , HORVU1Hr1G078000.8 , HORVU1Hr1G078000.9 , HORVU1Hr1G078000.4 , HORVU1Hr1G078000.5 , HORVU1Hr1G078000.6 , HORVU1Hr1G078000.7 , HORVU1Hr1G078000.1 , HORVU1Hr1G078000.2 , HORVU1Hr1G078000.3 , HORVU1Hr1G078000.11
Wheat TraesCS1B02G340500 , TraesCS1A02G327100 , TraesCS1A02G327100 , TraesCS1D02G329200
Populus PNT24875 , PNT24876


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cDNA sequences
Sobic.009G191600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
2 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
3 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
4 Sobic.001G041100 RNA recognition motif containing protein, putative, expressed K12833: pre-mRNA branch site protein p14
5 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
6 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
7 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
8 Sobic.002G376500 OsCML8 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
10 Sobic.003G227200 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
11 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
12 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
13 Sobic.006G239300 thiamine-repressible mitochondrial transport protein THI74, putative, expressed K15289: solute carrier family 35, member F5
14 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
15 Sobic.004G123000 expressed protein -
16 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
17 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
18 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
19 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
20 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561


Gene co-expression network
sample Sobic009G191600 Sobic009G191600 Sobic001G066700 Sobic001G066700 Sobic009G191600--Sobic001G066700 Sobic003G362400 Sobic003G362400 Sobic009G191600--Sobic003G362400 Sobic006G062800 Sobic006G062800 Sobic009G191600--Sobic006G062800 Sobic001G041100 Sobic001G041100 Sobic009G191600--Sobic001G041100 Sobic003G358300 Sobic003G358300 Sobic009G191600--Sobic003G358300 Sobic010G213400 Sobic010G213400 Sobic009G191600--Sobic010G213400 Sobic003G023500 Sobic003G023500 Sobic009G191600--Sobic003G023500 Sobic002G376500 Sobic002G376500 Sobic009G191600--Sobic002G376500 Sobic001G224400 Sobic001G224400 Sobic009G191600--Sobic001G224400 Sobic001G066700--Sobic003G358300 Sobic003G403400 Sobic003G403400 Sobic001G066700--Sobic003G403400 Sobic002G218000 Sobic002G218000 Sobic001G066700--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic001G066700--Sobic005G111100 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic003G233500 Sobic003G233500 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200 Sobic002G078400 Sobic002G078400 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic001G331900 Sobic001G331900 Sobic003G362400--Sobic001G331900 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic006G062800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic009G033700 Sobic009G033700 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900 Sobic004G265700 Sobic004G265700 Sobic001G041100--Sobic004G265700 Sobic006G141500 Sobic006G141500 Sobic001G041100--Sobic006G141500 Sobic010G163600 Sobic010G163600 Sobic001G041100--Sobic010G163600 Sobic001G041100--Sobic003G362400 Sobic001G041100--Sobic001G066700 Sobic001G041100--Sobic010G213400 Sobic006G010600 Sobic006G010600 Sobic001G041100--Sobic006G010600 Sobic001G041100--Sobic009G191600 Sobic007G203700 Sobic007G203700 Sobic001G041100--Sobic007G203700 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic010G213400--Sobic003G249800 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G213400--Sobic010G163600 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic004G222600 Sobic004G222600 Sobic003G023500--Sobic004G222600 Sobic003G217100 Sobic003G217100 Sobic003G023500--Sobic003G217100 Sobic002G214900 Sobic002G214900 Sobic003G023500--Sobic002G214900 Sobic001G214200 Sobic001G214200 Sobic003G023500--Sobic001G214200 Sobic001G409900 Sobic001G409900 Sobic003G023500--Sobic001G409900 Sobic003G023500--Sobic009G191600 Sobic006G222400 Sobic006G222400 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic003G023500--Sobic002G376500 Sobic002G376500--Sobic003G362400 Sobic010G042800 Sobic010G042800 Sobic002G376500--Sobic010G042800 Sobic002G376500--Sobic001G529000 Sobic010G210000 Sobic010G210000 Sobic002G376500--Sobic010G210000 Sobic001G309500 Sobic001G309500 Sobic002G376500--Sobic001G309500 Sobic002G376500--Sobic006G141500 Sobic002G376500--Sobic002G218000 Sobic002G159500 Sobic002G159500 Sobic002G376500--Sobic002G159500 Sobic002G376500--Sobic010G153100 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic001G224400--Sobic010G213400 Sobic008G189300 Sobic008G189300 Sobic001G224400--Sobic008G189300 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic002G222900 Sobic002G222900 Sobic001G224400--Sobic002G222900
Octagon: transcription factors


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