Gene annotation
Transcriptome id Sobic.002G084500.1,Sobic.002G084500.2
Synonym Sb02g007040
Functional annotation expressed protein
UniProt C5XDJ0
Pfam PF15054
Panther DB PTHR33528 PTHR33528:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35736 : -
RAP-DB (Rice) LOC_Os07g13534.1 : expressed protein
MaizeGDB (Corn) Zm00025a013357
Brachypodium KQK20656
Barley HORVU5Hr1G001600.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G084500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G408900 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed -
2 Sobic.001G433700 chorismate synthase 2, chloroplast precursor, putative, expressed K01736: chorismate synthase
3 Sobic.001G331900 expressed protein -
4 Sobic.004G284500 ORM1, putative, expressed -
5 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
6 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
7 Sobic.006G141500 expressed protein -
8 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
9 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
10 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
11 Sobic.010G042100 transcription elongation factor 1, putative, expressed -
12 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
13 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
14 Sobic.001G132100 expressed protein -
15 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
16 Sobic.003G104700 Rer1 protein, putative, expressed -
17 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
18 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
19 Sobic.005G003800 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
20 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic002G084500 Sobic002G084500 Sobic001G408900 Sobic001G408900 Sobic002G084500--Sobic001G408900 Sobic001G433700 Sobic001G433700 Sobic002G084500--Sobic001G433700 Sobic001G331900 Sobic001G331900 Sobic002G084500--Sobic001G331900 Sobic004G284500 Sobic004G284500 Sobic002G084500--Sobic004G284500 Sobic002G419100 Sobic002G419100 Sobic002G084500--Sobic002G419100 Sobic002G153500 Sobic002G153500 Sobic002G084500--Sobic002G153500 Sobic006G141500 Sobic006G141500 Sobic002G084500--Sobic006G141500 Sobic008G189300 Sobic008G189300 Sobic002G084500--Sobic008G189300 Sobic009G146100 Sobic009G146100 Sobic002G084500--Sobic009G146100 Sobic001G408900--Sobic002G084500 Sobic001G233532 Sobic001G233532 Sobic001G408900--Sobic001G233532 Sobic001G058100 Sobic001G058100 Sobic001G408900--Sobic001G058100 Sobic007G096700 Sobic007G096700 Sobic001G408900--Sobic007G096700 Sobic001G408900--Sobic002G419100 Sobic002G159500 Sobic002G159500 Sobic001G408900--Sobic002G159500 Sobic006G281800 Sobic006G281800 Sobic001G408900--Sobic006G281800 Sobic010G042100 Sobic010G042100 Sobic001G408900--Sobic010G042100 Sobic004G276100 Sobic004G276100 Sobic001G408900--Sobic004G276100 Sobic009G149400 Sobic009G149400 Sobic001G433700--Sobic009G149400 Sobic001G018800 Sobic001G018800 Sobic001G433700--Sobic001G018800 Sobic002G187500 Sobic002G187500 Sobic001G433700--Sobic002G187500 Sobic010G023800 Sobic010G023800 Sobic001G433700--Sobic010G023800 Sobic001G433700--Sobic002G084500 Sobic001G224400 Sobic001G224400 Sobic001G433700--Sobic001G224400 Sobic004G272800 Sobic004G272800 Sobic001G433700--Sobic004G272800 Sobic001G132100 Sobic001G132100 Sobic001G433700--Sobic001G132100 Sobic010G154700 Sobic010G154700 Sobic001G433700--Sobic010G154700 Sobic004G107600 Sobic004G107600 Sobic001G331900--Sobic004G107600 Sobic005G157200 Sobic005G157200 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic002G078400 Sobic002G078400 Sobic001G331900--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic001G331900--Sobic008G132800 Sobic004G300900 Sobic004G300900 Sobic001G331900--Sobic004G300900 Sobic001G377800 Sobic001G377800 Sobic001G331900--Sobic001G377800 Sobic003G362400 Sobic003G362400 Sobic001G331900--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic001G331900--Sobic001G529000 Sobic010G213400 Sobic010G213400 Sobic004G284500--Sobic010G213400 Sobic006G182100 Sobic006G182100 Sobic004G284500--Sobic006G182100 Sobic009G111600 Sobic009G111600 Sobic004G284500--Sobic009G111600 Sobic004G284500--Sobic002G153500 Sobic004G284500--Sobic004G272800 Sobic003G368500 Sobic003G368500 Sobic004G284500--Sobic003G368500 Sobic009G033700 Sobic009G033700 Sobic004G284500--Sobic009G033700 Sobic001G445800 Sobic001G445800 Sobic004G284500--Sobic001G445800 Sobic001G281400 Sobic001G281400 Sobic004G284500--Sobic001G281400 Sobic009G213500 Sobic009G213500 Sobic002G419100--Sobic009G213500 Sobic010G205300 Sobic010G205300 Sobic002G419100--Sobic010G205300 Sobic003G186700 Sobic003G186700 Sobic002G419100--Sobic003G186700 Sobic002G419100--Sobic002G084500 Sobic002G341800 Sobic002G341800 Sobic002G419100--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic002G419100--Sobic004G310500 Sobic004G212200 Sobic004G212200 Sobic002G419100--Sobic004G212200 Sobic006G252200 Sobic006G252200 Sobic002G419100--Sobic006G252200 Sobic003G349300 Sobic003G349300 Sobic002G419100--Sobic003G349300 Sobic002G153500--Sobic001G224400 Sobic002G153500--Sobic008G189300 Sobic002G153500--Sobic004G284500 Sobic002G153500--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G153500--Sobic004G225500 Sobic002G153500--Sobic001G132100 Sobic008G032100 Sobic008G032100 Sobic002G153500--Sobic008G032100 Sobic007G115100 Sobic007G115100 Sobic002G153500--Sobic007G115100 Sobic004G204900 Sobic004G204900 Sobic002G153500--Sobic004G204900 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic006G141500--Sobic002G218000 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic008G189300--Sobic004G225500 Sobic008G189300--Sobic004G272800 Sobic008G189300--Sobic001G224400 Sobic008G189300--Sobic002G153500 Sobic008G189300--Sobic010G154700 Sobic008G189300--Sobic001G132100 Sobic008G189300--Sobic002G187500 Sobic001G048832 Sobic001G048832 Sobic008G189300--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic008G189300--Sobic001G340500 Sobic010G253800 Sobic010G253800 Sobic009G146100--Sobic010G253800 Sobic009G146100--Sobic003G253000 Sobic001G415500 Sobic001G415500 Sobic009G146100--Sobic001G415500 Sobic001G433400 Sobic001G433400 Sobic009G146100--Sobic001G433400 Sobic009G135600 Sobic009G135600 Sobic009G146100--Sobic009G135600 Sobic009G146100--Sobic008G161800 Sobic007G186300 Sobic007G186300 Sobic009G146100--Sobic007G186300 Sobic001G461900 Sobic001G461900 Sobic009G146100--Sobic001G461900 Sobic007G045600 Sobic007G045600 Sobic009G146100--Sobic007G045600
Octagon: transcription factors


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