Gene annotation
Transcriptome id Sobic.002G419100.2,Sobic.002G419100.1
Synonym Sb02g043080, EMB1401, EIF2BETA
Functional annotation eukaryotic translation initiation factor 2 subunit beta, putative, expressed
UniProt A0A1B6QGC5 , A0A1B6QG99
Pfam PF01873
Panther DB PTHR23001
NCBI CDD KOG2768; Translation initiation factor 2, beta subunit (eIF-2beta)
KEGG Orthology K03238; translation initiation factor 2 subunit 2
Gene Ontology GO:0003743; translation initiation factor activity GO:0006413translational initiation


Orthologs (automatic annotation)
TAIR AT5G20920 : eukaryotic translation initiation factor 2 beta subunit
RAP-DB (Rice) LOC_Os03g21550.2 : eukaryotic translation initiation factor 2 subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a015450 , Zm00025a049173
Brachypodium KQK21819 , KQK21817
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G419100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G213500 NAP domain containing protein, putative, expressed K11279: NAP1L1, nucleosome assembly protein 1-like 1
2 Sobic.010G205300 secreted salivary protein, putative, expressed -
3 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
4 Sobic.002G084500 expressed protein -
5 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
6 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
7 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
8 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
9 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
10 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
11 Sobic.004G062400 LSM domain containing protein, expressed K11098: SNRPF, small nuclear ribonucleoprotein F
12 Sobic.005G003800 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
13 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
14 Sobic.002G300300 rRNA-processing protein EBP2, putative, expressed K14823: EBP2, rRNA-processing protein EBP2
15 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
16 Sobic.004G194900 expressed protein -
17 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
18 Sobic.001G408900 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed -
19 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
20 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7


Gene co-expression network
sample Sobic002G419100 Sobic002G419100 Sobic009G213500 Sobic009G213500 Sobic002G419100--Sobic009G213500 Sobic010G205300 Sobic010G205300 Sobic002G419100--Sobic010G205300 Sobic003G186700 Sobic003G186700 Sobic002G419100--Sobic003G186700 Sobic002G084500 Sobic002G084500 Sobic002G419100--Sobic002G084500 Sobic002G341800 Sobic002G341800 Sobic002G419100--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic002G419100--Sobic004G310500 Sobic004G212200 Sobic004G212200 Sobic002G419100--Sobic004G212200 Sobic006G252200 Sobic006G252200 Sobic002G419100--Sobic006G252200 Sobic003G349300 Sobic003G349300 Sobic002G419100--Sobic003G349300 Sobic009G213500--Sobic002G419100 Sobic004G216400 Sobic004G216400 Sobic009G213500--Sobic004G216400 Sobic003G312200 Sobic003G312200 Sobic009G213500--Sobic003G312200 Sobic002G071000 Sobic002G071000 Sobic009G213500--Sobic002G071000 Sobic001G283200 Sobic001G283200 Sobic009G213500--Sobic001G283200 Sobic009G213500--Sobic003G186700 Sobic010G002400 Sobic010G002400 Sobic009G213500--Sobic010G002400 Sobic009G075800 Sobic009G075800 Sobic009G213500--Sobic009G075800 Sobic002G262000 Sobic002G262000 Sobic009G213500--Sobic002G262000 Sobic004G232800 Sobic004G232800 Sobic010G205300--Sobic004G232800 Sobic010G205300--Sobic003G349300 Sobic007G168600 Sobic007G168600 Sobic010G205300--Sobic007G168600 Sobic001G502200 Sobic001G502200 Sobic010G205300--Sobic001G502200 Sobic002G281300 Sobic002G281300 Sobic010G205300--Sobic002G281300 Sobic004G356900 Sobic004G356900 Sobic010G205300--Sobic004G356900 Sobic003G261400 Sobic003G261400 Sobic010G205300--Sobic003G261400 Sobic004G194900 Sobic004G194900 Sobic010G205300--Sobic004G194900 Sobic001G067900 Sobic001G067900 Sobic010G205300--Sobic001G067900 Sobic004G082900 Sobic004G082900 Sobic003G186700--Sobic004G082900 Sobic003G186700--Sobic002G419100 Sobic006G044600 Sobic006G044600 Sobic003G186700--Sobic006G044600 Sobic003G280300 Sobic003G280300 Sobic003G186700--Sobic003G280300 Sobic004G176400 Sobic004G176400 Sobic003G186700--Sobic004G176400 Sobic003G422900 Sobic003G422900 Sobic003G186700--Sobic003G422900 Sobic009G139800 Sobic009G139800 Sobic003G186700--Sobic009G139800 Sobic001G010700 Sobic001G010700 Sobic003G186700--Sobic001G010700 Sobic003G186700--Sobic002G341800 Sobic001G408900 Sobic001G408900 Sobic002G084500--Sobic001G408900 Sobic001G433700 Sobic001G433700 Sobic002G084500--Sobic001G433700 Sobic001G331900 Sobic001G331900 Sobic002G084500--Sobic001G331900 Sobic004G284500 Sobic004G284500 Sobic002G084500--Sobic004G284500 Sobic002G084500--Sobic002G419100 Sobic002G153500 Sobic002G153500 Sobic002G084500--Sobic002G153500 Sobic006G141500 Sobic006G141500 Sobic002G084500--Sobic006G141500 Sobic008G189300 Sobic008G189300 Sobic002G084500--Sobic008G189300 Sobic009G146100 Sobic009G146100 Sobic002G084500--Sobic009G146100 Sobic001G458700 Sobic001G458700 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic001G481700 Sobic001G481700 Sobic002G341800--Sobic001G481700 Sobic007G176200 Sobic007G176200 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G394600 Sobic002G394600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800 Sobic004G310500--Sobic004G194900 Sobic004G310500--Sobic009G075800 Sobic004G310500--Sobic006G044600 Sobic004G310500--Sobic001G283200 Sobic009G257600 Sobic009G257600 Sobic004G310500--Sobic009G257600 Sobic008G156700 Sobic008G156700 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic002G393500 Sobic002G393500 Sobic004G212200--Sobic002G393500 Sobic009G228800 Sobic009G228800 Sobic004G212200--Sobic009G228800 Sobic004G212200--Sobic003G261400 Sobic003G274800 Sobic003G274800 Sobic004G212200--Sobic003G274800 Sobic010G000900 Sobic010G000900 Sobic004G212200--Sobic010G000900 Sobic001G388200 Sobic001G388200 Sobic004G212200--Sobic001G388200 Sobic002G166900 Sobic002G166900 Sobic004G212200--Sobic002G166900 Sobic003G261500 Sobic003G261500 Sobic004G212200--Sobic003G261500 Sobic004G212200--Sobic001G512300 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic004G224900 Sobic004G224900 Sobic006G252200--Sobic004G224900 Sobic006G252200--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic006G252200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic006G252200--Sobic002G428200 Sobic004G138800 Sobic004G138800 Sobic006G252200--Sobic004G138800 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic003G349300--Sobic010G205300 Sobic001G294900 Sobic001G294900 Sobic003G349300--Sobic001G294900 Sobic009G135600 Sobic009G135600 Sobic003G349300--Sobic009G135600 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic003G349300--Sobic001G283200 Sobic003G349300--Sobic003G261400 Sobic003G349300--Sobic007G168600
Octagon: transcription factors


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