Gene annotation
Transcriptome id Sobic.009G213500.2,Sobic.009G213500.1
Synonym NFA2, NFA02, NAP1, Sb09g026910, 2
Functional annotation NAP domain containing protein, putative, expressed
UniProt A0A1B6P9U7 , A0A1B6P9Z6
Pfam PF00956
Panther DB PTHR11875 PTHR11875:SF73
NCBI CDD KOG1507; Nucleosome assembly protein NAP-1
KEGG Orthology K11279; NAP1L1, nucleosome assembly protein 1-like 1
Gene Ontology GO:0006334; nucleosome assembly GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT2G19480 : nucleosome assembly protein 1;2
RAP-DB (Rice) LOC_Os05g46230.1 : NAP domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a038314 , Zm00025a044399
Brachypodium KQK05147
Barley HORVU1Hr1G080060.15 , HORVU1Hr1G080060.14 , HORVU1Hr1G080060.11 , HORVU1Hr1G080060.10 , HORVU1Hr1G080060.12 , HORVU1Hr1G080060.9 , HORVU1Hr1G080060.8 , HORVU1Hr1G080060.1 , HORVU1Hr1G080060.3 , HORVU1Hr1G080060.2 , HORVU1Hr1G080060.5 , HORVU1Hr1G080060.4 , HORVU1Hr1G080060.7 , HORVU1Hr1G080060.6 , HORVU1Hr1G078730.1
Wheat TraesCS1D02G364900 , TraesCS1B02G377000 , TraesCS1B02G377000 , TraesCS1A02G360500 , TraesCS1A02G360500
Populus -


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cDNA sequences
Sobic.009G213500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
2 Sobic.004G216400 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
3 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
4 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
5 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
6 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
7 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
8 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
9 Sobic.002G262000 ankyrin repeat domain containing protein, putative, expressed -
10 Sobic.004G232800 expressed protein -
11 Sobic.001G082100 TIP41, putative, expressed K17607: TIPRL, type 2A phosphatase activator TIP41
12 Sobic.002G393500 expressed protein -
13 Sobic.010G209000 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
14 Sobic.003G366500 transport protein particle component, Bet3, domain containing protein, expressed -
15 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
16 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
17 Sobic.003G153700 expressed protein -
18 Sobic.001G103900 signal peptide peptidase domain containing protein, expressed -
19 Sobic.002G178601 - -
20 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1


Gene co-expression network
sample Sobic009G213500 Sobic009G213500 Sobic002G419100 Sobic002G419100 Sobic009G213500--Sobic002G419100 Sobic004G216400 Sobic004G216400 Sobic009G213500--Sobic004G216400 Sobic003G312200 Sobic003G312200 Sobic009G213500--Sobic003G312200 Sobic002G071000 Sobic002G071000 Sobic009G213500--Sobic002G071000 Sobic001G283200 Sobic001G283200 Sobic009G213500--Sobic001G283200 Sobic003G186700 Sobic003G186700 Sobic009G213500--Sobic003G186700 Sobic010G002400 Sobic010G002400 Sobic009G213500--Sobic010G002400 Sobic009G075800 Sobic009G075800 Sobic009G213500--Sobic009G075800 Sobic002G262000 Sobic002G262000 Sobic009G213500--Sobic002G262000 Sobic002G419100--Sobic009G213500 Sobic010G205300 Sobic010G205300 Sobic002G419100--Sobic010G205300 Sobic002G419100--Sobic003G186700 Sobic002G084500 Sobic002G084500 Sobic002G419100--Sobic002G084500 Sobic002G341800 Sobic002G341800 Sobic002G419100--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic002G419100--Sobic004G310500 Sobic004G212200 Sobic004G212200 Sobic002G419100--Sobic004G212200 Sobic006G252200 Sobic006G252200 Sobic002G419100--Sobic006G252200 Sobic003G349300 Sobic003G349300 Sobic002G419100--Sobic003G349300 Sobic010G262433 Sobic010G262433 Sobic004G216400--Sobic010G262433 Sobic001G468600 Sobic001G468600 Sobic004G216400--Sobic001G468600 Sobic004G216400--Sobic002G341800 Sobic004G216400--Sobic001G283200 Sobic004G216400--Sobic004G310500 Sobic001G021300 Sobic001G021300 Sobic004G216400--Sobic001G021300 Sobic009G190300 Sobic009G190300 Sobic004G216400--Sobic009G190300 Sobic004G216400--Sobic002G071000 Sobic001G082100 Sobic001G082100 Sobic004G216400--Sobic001G082100 Sobic006G034000 Sobic006G034000 Sobic003G312200--Sobic006G034000 Sobic001G091300 Sobic001G091300 Sobic003G312200--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic003G312200--Sobic001G323000 Sobic001G206900 Sobic001G206900 Sobic003G312200--Sobic001G206900 Sobic009G228700 Sobic009G228700 Sobic003G312200--Sobic009G228700 Sobic001G261436 Sobic001G261436 Sobic003G312200--Sobic001G261436 Sobic001G085100 Sobic001G085100 Sobic003G312200--Sobic001G085100 Sobic010G130000 Sobic010G130000 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500 Sobic007G079300 Sobic007G079300 Sobic002G071000--Sobic007G079300 Sobic001G234200 Sobic001G234200 Sobic002G071000--Sobic001G234200 Sobic004G348900 Sobic004G348900 Sobic002G071000--Sobic004G348900 Sobic006G010000 Sobic006G010000 Sobic002G071000--Sobic006G010000 Sobic009G249100 Sobic009G249100 Sobic002G071000--Sobic009G249100 Sobic003G293300 Sobic003G293300 Sobic002G071000--Sobic003G293300 Sobic003G117300 Sobic003G117300 Sobic002G071000--Sobic003G117300 Sobic004G082900 Sobic004G082900 Sobic002G071000--Sobic004G082900 Sobic006G049700 Sobic006G049700 Sobic002G071000--Sobic006G049700 Sobic001G458700 Sobic001G458700 Sobic001G283200--Sobic001G458700 Sobic003G261400 Sobic003G261400 Sobic001G283200--Sobic003G261400 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic001G283200--Sobic004G082900 Sobic003G186700--Sobic004G082900 Sobic003G186700--Sobic002G419100 Sobic006G044600 Sobic006G044600 Sobic003G186700--Sobic006G044600 Sobic003G280300 Sobic003G280300 Sobic003G186700--Sobic003G280300 Sobic004G176400 Sobic004G176400 Sobic003G186700--Sobic004G176400 Sobic003G422900 Sobic003G422900 Sobic003G186700--Sobic003G422900 Sobic009G139800 Sobic009G139800 Sobic003G186700--Sobic009G139800 Sobic001G010700 Sobic001G010700 Sobic003G186700--Sobic001G010700 Sobic003G186700--Sobic002G341800 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic003G012200 Sobic003G012200 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic009G222500 Sobic009G222500 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic001G199100 Sobic001G199100 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic004G356900 Sobic004G356900 Sobic002G262000--Sobic004G356900 Sobic002G262000--Sobic002G071000 Sobic002G262000--Sobic003G117300 Sobic010G108900 Sobic010G108900 Sobic002G262000--Sobic010G108900 Sobic002G262000--Sobic006G049700 Sobic002G262000--Sobic001G234200 Sobic006G183000 Sobic006G183000 Sobic002G262000--Sobic006G183000 Sobic004G232800 Sobic004G232800 Sobic002G262000--Sobic004G232800 Sobic002G262000--Sobic004G348900
Octagon: transcription factors


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