Gene annotation
Transcriptome id Sobic.002G178601.1
Synonym -
Functional annotation -
UniProt A0A1W0W4V1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G393500 expressed protein -
2 Sobic.008G133600 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase
3 Sobic.003G344900 selT-like protein precursor, putative, expressed -
4 Sobic.003G239800 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
5 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
6 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
7 Sobic.001G113000 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
8 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
9 Sobic.002G430800 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
10 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
11 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
12 Sobic.004G216400 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
13 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
14 Sobic.009G138700 WD repeat-containing protein 55, putative, expressed -
15 Sobic.007G098200 - -
16 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
17 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
18 Sobic.001G181700 expressed protein -
19 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
20 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5


Gene co-expression network
sample Sobic002G178601 Sobic002G178601 Sobic002G393500 Sobic002G393500 Sobic002G178601--Sobic002G393500 Sobic008G133600 Sobic008G133600 Sobic002G178601--Sobic008G133600 Sobic003G344900 Sobic003G344900 Sobic002G178601--Sobic003G344900 Sobic003G239800 Sobic003G239800 Sobic002G178601--Sobic003G239800 Sobic009G228800 Sobic009G228800 Sobic002G178601--Sobic009G228800 Sobic003G015900 Sobic003G015900 Sobic002G178601--Sobic003G015900 Sobic001G113000 Sobic001G113000 Sobic002G178601--Sobic001G113000 Sobic004G235000 Sobic004G235000 Sobic002G178601--Sobic004G235000 Sobic002G430800 Sobic002G430800 Sobic002G178601--Sobic002G430800 Sobic004G212200 Sobic004G212200 Sobic002G393500--Sobic004G212200 Sobic003G274800 Sobic003G274800 Sobic002G393500--Sobic003G274800 Sobic002G393500--Sobic002G178601 Sobic002G393500--Sobic009G228800 Sobic010G000900 Sobic010G000900 Sobic002G393500--Sobic010G000900 Sobic001G047400 Sobic001G047400 Sobic002G393500--Sobic001G047400 Sobic002G226900 Sobic002G226900 Sobic002G393500--Sobic002G226900 Sobic001G021300 Sobic001G021300 Sobic002G393500--Sobic001G021300 Sobic003G261400 Sobic003G261400 Sobic002G393500--Sobic003G261400 Sobic001G257700 Sobic001G257700 Sobic008G133600--Sobic001G257700 Sobic008G133600--Sobic002G178601 Sobic001G043800 Sobic001G043800 Sobic008G133600--Sobic001G043800 Sobic004G040900 Sobic004G040900 Sobic008G133600--Sobic004G040900 Sobic002G431300 Sobic002G431300 Sobic008G133600--Sobic002G431300 Sobic006G105800 Sobic006G105800 Sobic008G133600--Sobic006G105800 Sobic010G262000 Sobic010G262000 Sobic008G133600--Sobic010G262000 Sobic002G209400 Sobic002G209400 Sobic008G133600--Sobic002G209400 Sobic009G238850 Sobic009G238850 Sobic008G133600--Sobic009G238850 Sobic003G012200 Sobic003G012200 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic004G348300 Sobic004G348300 Sobic003G344900--Sobic004G348300 Sobic009G259400 Sobic009G259400 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic004G356900 Sobic004G356900 Sobic003G239800--Sobic004G356900 Sobic009G004600 Sobic009G004600 Sobic003G239800--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic003G239800--Sobic010G205300 Sobic003G239800--Sobic009G228800 Sobic004G232800 Sobic004G232800 Sobic003G239800--Sobic004G232800 Sobic006G280600 Sobic006G280600 Sobic003G239800--Sobic006G280600 Sobic002G341800 Sobic002G341800 Sobic003G239800--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic003G239800--Sobic004G310500 Sobic007G188300 Sobic007G188300 Sobic003G239800--Sobic007G188300 Sobic001G073000 Sobic001G073000 Sobic009G228800--Sobic001G073000 Sobic009G228800--Sobic004G212200 Sobic007G203700 Sobic007G203700 Sobic009G228800--Sobic007G203700 Sobic009G228800--Sobic003G015900 Sobic009G228800--Sobic010G000900 Sobic003G248600 Sobic003G248600 Sobic009G228800--Sobic003G248600 Sobic001G512300 Sobic001G512300 Sobic009G228800--Sobic001G512300 Sobic009G228800--Sobic004G356900 Sobic009G228800--Sobic002G393500 Sobic003G015900--Sobic001G051200 Sobic010G083700 Sobic010G083700 Sobic003G015900--Sobic010G083700 Sobic002G352600 Sobic002G352600 Sobic003G015900--Sobic002G352600 Sobic003G015900--Sobic001G047400 Sobic009G165800 Sobic009G165800 Sobic003G015900--Sobic009G165800 Sobic004G086600 Sobic004G086600 Sobic003G015900--Sobic004G086600 Sobic004G253000 Sobic004G253000 Sobic003G015900--Sobic004G253000 Sobic003G015900--Sobic010G000900 Sobic009G246950 Sobic009G246950 Sobic003G015900--Sobic009G246950 Sobic002G110700 Sobic002G110700 Sobic001G113000--Sobic002G110700 Sobic001G113000--Sobic002G352600 Sobic001G358000 Sobic001G358000 Sobic001G113000--Sobic001G358000 Sobic004G121100 Sobic004G121100 Sobic001G113000--Sobic004G121100 Sobic010G027600 Sobic010G027600 Sobic001G113000--Sobic010G027600 Sobic004G348100 Sobic004G348100 Sobic001G113000--Sobic004G348100 Sobic001G080700 Sobic001G080700 Sobic001G113000--Sobic001G080700 Sobic007G058700 Sobic007G058700 Sobic001G113000--Sobic007G058700 Sobic001G113000--Sobic002G178601 Sobic009G222500 Sobic009G222500 Sobic004G235000--Sobic009G222500 Sobic006G092400 Sobic006G092400 Sobic004G235000--Sobic006G092400 Sobic003G214500 Sobic003G214500 Sobic004G235000--Sobic003G214500 Sobic003G220800 Sobic003G220800 Sobic004G235000--Sobic003G220800 Sobic004G235000--Sobic010G027600 Sobic001G007200 Sobic001G007200 Sobic004G235000--Sobic001G007200 Sobic004G235000--Sobic003G012200 Sobic004G235000--Sobic004G086600 Sobic009G084000 Sobic009G084000 Sobic004G235000--Sobic009G084000 Sobic002G430800--Sobic002G178601 Sobic002G431600 Sobic002G431600 Sobic002G430800--Sobic002G431600 Sobic002G288900 Sobic002G288900 Sobic002G430800--Sobic002G288900 Sobic010G263900 Sobic010G263900 Sobic002G430800--Sobic010G263900 Sobic009G219900 Sobic009G219900 Sobic002G430800--Sobic009G219900 Sobic004G060600 Sobic004G060600 Sobic002G430800--Sobic004G060600 Sobic002G298300 Sobic002G298300 Sobic002G430800--Sobic002G298300 Sobic004G061800 Sobic004G061800 Sobic002G430800--Sobic004G061800 Sobic004G067100 Sobic004G067100 Sobic002G430800--Sobic004G067100
Octagon: transcription factors


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