Gene annotation
Transcriptome id Sobic.007G098200.1
Synonym
Functional annotation -
UniProt A0A1B6PGS9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G156700 phosphoribulokinase/Uridine kinase family protein, expressed -
2 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
3 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
4 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
5 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
6 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
7 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
8 Sobic.002G393500 expressed protein -
9 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
10 Sobic.009G222500 expressed protein -
11 Sobic.001G181700 expressed protein -
12 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
13 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
14 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
15 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
16 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
17 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
19 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
20 Sobic.002G116900 expressed protein -


Gene co-expression network
sample Sobic007G098200 Sobic007G098200 Sobic008G156700 Sobic008G156700 Sobic007G098200--Sobic008G156700 Sobic001G199100 Sobic001G199100 Sobic007G098200--Sobic001G199100 Sobic002G226900 Sobic002G226900 Sobic007G098200--Sobic002G226900 Sobic003G012200 Sobic003G012200 Sobic007G098200--Sobic003G012200 Sobic009G075800 Sobic009G075800 Sobic007G098200--Sobic009G075800 Sobic001G047400 Sobic001G047400 Sobic007G098200--Sobic001G047400 Sobic004G212200 Sobic004G212200 Sobic007G098200--Sobic004G212200 Sobic002G393500 Sobic002G393500 Sobic007G098200--Sobic002G393500 Sobic004G275700 Sobic004G275700 Sobic007G098200--Sobic004G275700 Sobic008G156700--Sobic007G098200 Sobic008G032600 Sobic008G032600 Sobic008G156700--Sobic008G032600 Sobic002G364800 Sobic002G364800 Sobic008G156700--Sobic002G364800 Sobic004G310500 Sobic004G310500 Sobic008G156700--Sobic004G310500 Sobic008G156700--Sobic009G075800 Sobic008G033500 Sobic008G033500 Sobic008G156700--Sobic008G033500 Sobic006G136400 Sobic006G136400 Sobic008G156700--Sobic006G136400 Sobic002G262900 Sobic002G262900 Sobic008G156700--Sobic002G262900 Sobic008G156700--Sobic002G226900 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic001G199100--Sobic004G348300 Sobic002G226900--Sobic009G075800 Sobic002G226900--Sobic004G275700 Sobic002G226900--Sobic003G012200 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic003G365300 Sobic003G365300 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic010G000900 Sobic010G000900 Sobic002G226900--Sobic010G000900 Sobic001G203900 Sobic001G203900 Sobic002G226900--Sobic001G203900 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic003G012200--Sobic001G047400 Sobic009G222500 Sobic009G222500 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic002G116900 Sobic002G116900 Sobic001G047400--Sobic002G116900 Sobic009G165800 Sobic009G165800 Sobic001G047400--Sobic009G165800 Sobic001G047400--Sobic010G000900 Sobic001G047400--Sobic001G085100 Sobic001G047400--Sobic010G251000 Sobic003G015900 Sobic003G015900 Sobic001G047400--Sobic003G015900 Sobic001G051200 Sobic001G051200 Sobic001G047400--Sobic001G051200 Sobic001G261436 Sobic001G261436 Sobic001G047400--Sobic001G261436 Sobic009G228700 Sobic009G228700 Sobic001G047400--Sobic009G228700 Sobic004G212200--Sobic002G393500 Sobic009G228800 Sobic009G228800 Sobic004G212200--Sobic009G228800 Sobic003G261400 Sobic003G261400 Sobic004G212200--Sobic003G261400 Sobic003G274800 Sobic003G274800 Sobic004G212200--Sobic003G274800 Sobic004G212200--Sobic010G000900 Sobic001G388200 Sobic001G388200 Sobic004G212200--Sobic001G388200 Sobic002G166900 Sobic002G166900 Sobic004G212200--Sobic002G166900 Sobic003G261500 Sobic003G261500 Sobic004G212200--Sobic003G261500 Sobic001G512300 Sobic001G512300 Sobic004G212200--Sobic001G512300 Sobic002G393500--Sobic004G212200 Sobic002G393500--Sobic003G274800 Sobic002G178601 Sobic002G178601 Sobic002G393500--Sobic002G178601 Sobic002G393500--Sobic009G228800 Sobic002G393500--Sobic010G000900 Sobic002G393500--Sobic001G047400 Sobic002G393500--Sobic002G226900 Sobic001G021300 Sobic001G021300 Sobic002G393500--Sobic001G021300 Sobic002G393500--Sobic003G261400 Sobic004G275700--Sobic001G199100 Sobic004G275700--Sobic001G091300 Sobic004G275700--Sobic009G075800 Sobic004G275700--Sobic002G262900 Sobic001G007000 Sobic001G007000 Sobic004G275700--Sobic001G007000 Sobic004G275700--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic004G275700--Sobic002G008800 Sobic004G275700--Sobic003G365300 Sobic004G275700--Sobic003G012200
Octagon: transcription factors


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