Gene annotation
Transcriptome id Sobic.002G116900.1
Synonym Sb02g009970
Functional annotation expressed protein
UniProt C5X4E7
Pfam -
Panther DB PTHR15157
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45990 : -
RAP-DB (Rice) LOC_Os07g23520.2 : expressed protein
MaizeGDB (Corn) Zm00025a013350
Brachypodium KQK06614 , KQK06612 , KQK06613 , PNT71423 , PNT71424 , PNT71425
Barley HORVU7Hr1G011830.8 , HORVU7Hr1G011830.9 , HORVU7Hr1G011830.6 , HORVU7Hr1G011830.7 , HORVU7Hr1G011830.4 , HORVU7Hr1G011830.5 , HORVU7Hr1G011830.2 , HORVU7Hr1G011830.3 , HORVU7Hr1G011830.1 , HORVU7Hr1G011830.10 , HORVU7Hr1G011830.11
Wheat TraesCS7A02G062800 , TraesCS4A02G426100 , TraesCS4A02G426100 , TraesCS7D02G057600
Populus -


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cDNA sequences
Sobic.002G116900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
2 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
3 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
4 Sobic.005G168600 NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
5 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
6 Sobic.004G183600 molybdenum cofactor biosynthesis protein 1, putative, expressed K03639: moaA, GTP 3',8-cyclase
7 Sobic.010G051300 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
9 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
10 Sobic.003G344900 selT-like protein precursor, putative, expressed -
11 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
12 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
14 Sobic.004G119100 expressed protein -
15 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
16 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
18 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
19 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
20 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter


Gene co-expression network
sample Sobic002G116900 Sobic002G116900 Sobic001G047400 Sobic001G047400 Sobic002G116900--Sobic001G047400 Sobic004G296400 Sobic004G296400 Sobic002G116900--Sobic004G296400 Sobic010G251000 Sobic010G251000 Sobic002G116900--Sobic010G251000 Sobic005G168600 Sobic005G168600 Sobic002G116900--Sobic005G168600 Sobic009G165800 Sobic009G165800 Sobic002G116900--Sobic009G165800 Sobic004G183600 Sobic004G183600 Sobic002G116900--Sobic004G183600 Sobic010G051300 Sobic010G051300 Sobic002G116900--Sobic010G051300 Sobic001G270400 Sobic001G270400 Sobic002G116900--Sobic001G270400 Sobic006G244700 Sobic006G244700 Sobic002G116900--Sobic006G244700 Sobic001G047400--Sobic002G116900 Sobic001G047400--Sobic009G165800 Sobic010G000900 Sobic010G000900 Sobic001G047400--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G047400--Sobic001G085100 Sobic001G047400--Sobic010G251000 Sobic003G015900 Sobic003G015900 Sobic001G047400--Sobic003G015900 Sobic001G051200 Sobic001G051200 Sobic001G047400--Sobic001G051200 Sobic001G261436 Sobic001G261436 Sobic001G047400--Sobic001G261436 Sobic009G228700 Sobic009G228700 Sobic001G047400--Sobic009G228700 Sobic003G233600 Sobic003G233600 Sobic004G296400--Sobic003G233600 Sobic003G169600 Sobic003G169600 Sobic004G296400--Sobic003G169600 Sobic010G138000 Sobic010G138000 Sobic004G296400--Sobic010G138000 Sobic001G085300 Sobic001G085300 Sobic004G296400--Sobic001G085300 Sobic004G296400--Sobic002G116900 Sobic002G166300 Sobic002G166300 Sobic004G296400--Sobic002G166300 Sobic001G390800 Sobic001G390800 Sobic004G296400--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic004G296400--Sobic001G124200 Sobic004G040900 Sobic004G040900 Sobic004G296400--Sobic004G040900 Sobic001G007000 Sobic001G007000 Sobic010G251000--Sobic001G007000 Sobic001G080700 Sobic001G080700 Sobic010G251000--Sobic001G080700 Sobic006G200600 Sobic006G200600 Sobic010G251000--Sobic006G200600 Sobic004G066200 Sobic004G066200 Sobic010G251000--Sobic004G066200 Sobic004G121100 Sobic004G121100 Sobic010G251000--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic010G251000--Sobic001G392300 Sobic010G251000--Sobic001G047400 Sobic004G353200 Sobic004G353200 Sobic010G251000--Sobic004G353200 Sobic008G046500 Sobic008G046500 Sobic010G251000--Sobic008G046500 Sobic005G168600--Sobic001G047400 Sobic005G168600--Sobic002G116900 Sobic005G168600--Sobic001G085100 Sobic006G280600 Sobic006G280600 Sobic005G168600--Sobic006G280600 Sobic010G277100 Sobic010G277100 Sobic005G168600--Sobic010G277100 Sobic005G168600--Sobic004G296400 Sobic002G262900 Sobic002G262900 Sobic005G168600--Sobic002G262900 Sobic005G168600--Sobic001G261436 Sobic005G168600--Sobic006G244700 Sobic009G165800--Sobic001G080700 Sobic009G165800--Sobic001G047400 Sobic006G101700 Sobic006G101700 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic003G264200 Sobic003G264200 Sobic009G165800--Sobic003G264200 Sobic004G183600--Sobic001G047400 Sobic004G183600--Sobic001G270400 Sobic001G137100 Sobic001G137100 Sobic004G183600--Sobic001G137100 Sobic004G183600--Sobic002G116900 Sobic002G230100 Sobic002G230100 Sobic004G183600--Sobic002G230100 Sobic003G354400 Sobic003G354400 Sobic004G183600--Sobic003G354400 Sobic001G120300 Sobic001G120300 Sobic004G183600--Sobic001G120300 Sobic007G024700 Sobic007G024700 Sobic004G183600--Sobic007G024700 Sobic001G394600 Sobic001G394600 Sobic004G183600--Sobic001G394600 Sobic010G051300--Sobic002G116900 Sobic008G104200 Sobic008G104200 Sobic010G051300--Sobic008G104200 Sobic010G051300--Sobic005G168600 Sobic010G172500 Sobic010G172500 Sobic010G051300--Sobic010G172500 Sobic010G051300--Sobic001G394600 Sobic010G051300--Sobic004G296400 Sobic006G217000 Sobic006G217000 Sobic010G051300--Sobic006G217000 Sobic008G032600 Sobic008G032600 Sobic010G051300--Sobic008G032600 Sobic010G051300--Sobic003G233600 Sobic001G270400--Sobic007G024700 Sobic009G094300 Sobic009G094300 Sobic001G270400--Sobic009G094300 Sobic010G205800 Sobic010G205800 Sobic001G270400--Sobic010G205800 Sobic003G109100 Sobic003G109100 Sobic001G270400--Sobic003G109100 Sobic001G270400--Sobic001G137100 Sobic002G270500 Sobic002G270500 Sobic001G270400--Sobic002G270500 Sobic001G121200 Sobic001G121200 Sobic001G270400--Sobic001G121200 Sobic004G052900 Sobic004G052900 Sobic001G270400--Sobic004G052900 Sobic001G199100 Sobic001G199100 Sobic001G270400--Sobic001G199100 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic005G044800 Sobic005G044800 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800
Octagon: transcription factors


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