Gene annotation
Transcriptome id Sobic.004G119100.2,Sobic.004G119100.4,Sobic.004G119100.3,Sobic.004G119100.1
Synonym Sb04g009930
Functional annotation expressed protein
UniProt A0A194YP34 , C5XZL1 , A0A194YP30
Pfam PF07047
Panther DB PTHR12499 PTHR12499:SF3
NCBI CDD KOG3335; Predicted coiled-coil protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28510 : Optic atrophy 3 protein (OPA3)
RAP-DB (Rice) LOC_Os02g20844.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ94612 , KQJ94613 , KQK03538 , KQJ94614 , KQJ94615
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
2 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
3 Sobic.006G119800 leucine rich repeat containing protein, expressed -
4 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
5 Sobic.001G000200 TBC domain containing protein, expressed -
6 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
7 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
8 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
9 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
10 Sobic.009G249200 transmembrane protein, putative, expressed -
11 Sobic.002G116900 expressed protein -
12 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
14 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
15 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
16 Sobic.006G194500 expressed protein -
17 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
18 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
19 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
20 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'


Gene co-expression network
sample Sobic004G119100 Sobic004G119100 Sobic001G253700 Sobic001G253700 Sobic004G119100--Sobic001G253700 Sobic006G034000 Sobic006G034000 Sobic004G119100--Sobic006G034000 Sobic006G119800 Sobic006G119800 Sobic004G119100--Sobic006G119800 Sobic003G233600 Sobic003G233600 Sobic004G119100--Sobic003G233600 Sobic001G000200 Sobic001G000200 Sobic004G119100--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G119100--Sobic010G205800 Sobic003G169600 Sobic003G169600 Sobic004G119100--Sobic003G169600 Sobic007G007000 Sobic007G007000 Sobic004G119100--Sobic007G007000 Sobic010G090900 Sobic010G090900 Sobic004G119100--Sobic010G090900 Sobic006G237400 Sobic006G237400 Sobic001G253700--Sobic006G237400 Sobic001G253700--Sobic001G000200 Sobic006G273200 Sobic006G273200 Sobic001G253700--Sobic006G273200 Sobic003G176600 Sobic003G176600 Sobic001G253700--Sobic003G176600 Sobic003G001000 Sobic003G001000 Sobic001G253700--Sobic003G001000 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic007G190333 Sobic007G190333 Sobic001G253700--Sobic007G190333 Sobic003G312200 Sobic003G312200 Sobic006G034000--Sobic003G312200 Sobic001G323000 Sobic001G323000 Sobic006G034000--Sobic001G323000 Sobic003G436300 Sobic003G436300 Sobic006G034000--Sobic003G436300 Sobic006G148200 Sobic006G148200 Sobic006G034000--Sobic006G148200 Sobic001G180900 Sobic001G180900 Sobic006G034000--Sobic001G180900 Sobic010G130000 Sobic010G130000 Sobic006G034000--Sobic010G130000 Sobic001G091300 Sobic001G091300 Sobic006G034000--Sobic001G091300 Sobic008G110600 Sobic008G110600 Sobic006G034000--Sobic008G110600 Sobic009G228700 Sobic009G228700 Sobic006G034000--Sobic009G228700 Sobic001G281600 Sobic001G281600 Sobic006G119800--Sobic001G281600 Sobic001G387600 Sobic001G387600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic007G019800 Sobic007G019800 Sobic006G119800--Sobic007G019800 Sobic006G119800--Sobic006G273200 Sobic010G068500 Sobic010G068500 Sobic006G119800--Sobic010G068500 Sobic004G301900 Sobic004G301900 Sobic006G119800--Sobic004G301900 Sobic006G119800--Sobic004G119100 Sobic009G233300 Sobic009G233300 Sobic006G119800--Sobic009G233300 Sobic004G127700 Sobic004G127700 Sobic003G233600--Sobic004G127700 Sobic002G166300 Sobic002G166300 Sobic003G233600--Sobic002G166300 Sobic009G199200 Sobic009G199200 Sobic003G233600--Sobic009G199200 Sobic003G233600--Sobic010G205800 Sobic001G079200 Sobic001G079200 Sobic003G233600--Sobic001G079200 Sobic003G233600--Sobic001G000200 Sobic004G296400 Sobic004G296400 Sobic003G233600--Sobic004G296400 Sobic003G273600 Sobic003G273600 Sobic003G233600--Sobic003G273600 Sobic004G136300 Sobic004G136300 Sobic003G233600--Sobic004G136300 Sobic001G000200--Sobic009G199200 Sobic001G000200--Sobic010G205800 Sobic001G000200--Sobic006G237400 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic001G390800 Sobic001G390800 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic010G205800--Sobic001G079200 Sobic003G169600--Sobic001G007000 Sobic001G392300 Sobic001G392300 Sobic003G169600--Sobic001G392300 Sobic008G089100 Sobic008G089100 Sobic003G169600--Sobic008G089100 Sobic006G041600 Sobic006G041600 Sobic003G169600--Sobic006G041600 Sobic003G169600--Sobic010G205800 Sobic003G443100 Sobic003G443100 Sobic003G169600--Sobic003G443100 Sobic003G169600--Sobic008G004600 Sobic004G092500 Sobic004G092500 Sobic003G169600--Sobic004G092500 Sobic010G251000 Sobic010G251000 Sobic003G169600--Sobic010G251000 Sobic009G217100 Sobic009G217100 Sobic007G007000--Sobic009G217100 Sobic001G123000 Sobic001G123000 Sobic007G007000--Sobic001G123000 Sobic001G137300 Sobic001G137300 Sobic007G007000--Sobic001G137300 Sobic002G251700 Sobic002G251700 Sobic007G007000--Sobic002G251700 Sobic009G259400 Sobic009G259400 Sobic007G007000--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic007G007000--Sobic010G000900 Sobic002G352600 Sobic002G352600 Sobic007G007000--Sobic002G352600 Sobic007G007000--Sobic001G121200 Sobic005G203800 Sobic005G203800 Sobic007G007000--Sobic005G203800 Sobic010G090900--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic010G090900--Sobic001G051200 Sobic001G098200 Sobic001G098200 Sobic010G090900--Sobic001G098200 Sobic010G090900--Sobic001G123000 Sobic010G090900--Sobic006G119800 Sobic010G090900--Sobic004G119100 Sobic003G250500 Sobic003G250500 Sobic010G090900--Sobic003G250500 Sobic001G263000 Sobic001G263000 Sobic010G090900--Sobic001G263000 Sobic002G092300 Sobic002G092300 Sobic010G090900--Sobic002G092300
Octagon: transcription factors


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