Gene annotation
Transcriptome id Sobic.009G249200.1
Synonym Sb09g029970, LAZ1
Functional annotation transmembrane protein, putative, expressed
UniProt C5YWJ7
Pfam PF03619
Panther DB PTHR23423 PTHR23423:SF33
NCBI CDD KOG2641; Predicted seven transmembrane receptor - rhodopsin family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38360 : Protein of unknown function (DUF300)
RAP-DB (Rice) LOC_Os02g44910.1 : transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a010205
Brachypodium KQJ84055
Barley -
Wheat TraesCS2D02G401800 , TraesCS2D02G401800 , TraesCS2D02G401800
Populus PNT21747


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cDNA sequences
Sobic.009G249200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
3 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
4 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
5 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
6 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
7 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
8 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
9 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
10 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
11 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
12 Sobic.001G497300 protein kinase domain containing protein, expressed -
13 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
15 Sobic.002G179900 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.004G002400 expressed protein -
17 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
18 Sobic.009G005500 expressed protein -
19 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
20 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic009G249200 Sobic009G249200 Sobic007G024700 Sobic007G024700 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic003G397800 Sobic003G397800 Sobic001G409600--Sobic003G397800 Sobic010G101800 Sobic010G101800 Sobic001G409600--Sobic010G101800 Sobic002G297200 Sobic002G297200 Sobic001G409600--Sobic002G297200 Sobic001G109800 Sobic001G109800 Sobic001G409600--Sobic001G109800 Sobic001G125200 Sobic001G125200 Sobic001G409600--Sobic001G125200 Sobic007G096000 Sobic007G096000 Sobic001G409600--Sobic007G096000 Sobic001G409600--Sobic009G249200 Sobic003G187400 Sobic003G187400 Sobic001G409600--Sobic003G187400 Sobic001G016000 Sobic001G016000 Sobic001G409600--Sobic001G016000 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic008G047800 Sobic008G047800 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic002G310200 Sobic002G310200 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic009G166300--Sobic007G217000 Sobic009G166300--Sobic003G408500 Sobic009G166300--Sobic001G474600 Sobic007G011300 Sobic007G011300 Sobic009G166300--Sobic007G011300 Sobic001G114000 Sobic001G114000 Sobic009G166300--Sobic001G114000 Sobic009G166300--Sobic008G047800 Sobic005G045300 Sobic005G045300 Sobic009G166300--Sobic005G045300 Sobic005G118600 Sobic005G118600 Sobic009G166300--Sobic005G118600 Sobic009G166300--Sobic001G109800 Sobic009G056800 Sobic009G056800 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic001G512700 Sobic001G512700 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic007G104800 Sobic007G104800 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic001G390800 Sobic001G390800 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic001G000200 Sobic001G000200 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic001G079200 Sobic001G079200 Sobic010G205800--Sobic001G079200 Sobic003G408500--Sobic009G166300 Sobic003G408500--Sobic005G045300 Sobic003G408500--Sobic001G512700 Sobic003G408500--Sobic004G205600 Sobic003G408500--Sobic007G217000 Sobic003G408500--Sobic003G397800 Sobic003G408500--Sobic004G021100 Sobic003G408500--Sobic001G109800 Sobic004G067700 Sobic004G067700 Sobic003G408500--Sobic004G067700 Sobic010G153700 Sobic010G153700 Sobic002G315200--Sobic010G153700 Sobic002G006900 Sobic002G006900 Sobic002G315200--Sobic002G006900 Sobic001G071400 Sobic001G071400 Sobic002G315200--Sobic001G071400 Sobic002G315200--Sobic008G047800 Sobic002G315200--Sobic001G220300 Sobic002G315200--Sobic001G512700 Sobic009G191000 Sobic009G191000 Sobic002G315200--Sobic009G191000 Sobic001G290100 Sobic001G290100 Sobic002G315200--Sobic001G290100 Sobic002G315200--Sobic001G497300 Sobic008G132600 Sobic008G132600 Sobic009G027300--Sobic008G132600 Sobic002G045600 Sobic002G045600 Sobic009G027300--Sobic002G045600 Sobic004G331100 Sobic004G331100 Sobic009G027300--Sobic004G331100 Sobic003G422500 Sobic003G422500 Sobic009G027300--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic009G027300--Sobic002G008900 Sobic003G101400 Sobic003G101400 Sobic009G027300--Sobic003G101400 Sobic001G050200 Sobic001G050200 Sobic009G027300--Sobic001G050200 Sobic009G027300--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic009G027300--Sobic007G075400
Octagon: transcription factors


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