Gene annotation
Transcriptome id Sobic.002G179900.1
Synonym ATH7, ATATH7, Sb02g022870
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A1W0W4Q0
Pfam PF12698 PF00005
Panther DB PTHR19229 PTHR19229:SF131
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT3G47780 : ABC2 homolog 6
RAP-DB (Rice) LOC_Os08g30770.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a046657
Brachypodium PNT68061 , PNT64441 , PNT64442 , KQJ98195 , KQJ89944
Barley HORVU5Hr1G056930.41 , HORVU5Hr1G056930.40 , HORVU5Hr1G056930.43 , HORVU5Hr1G056930.42 , HORVU5Hr1G056930.45 , HORVU5Hr1G056930.44 , HORVU5Hr1G056930.46 , HORVU5Hr1G056930.1 , HORVU5Hr1G056930.2 , HORVU5Hr1G056930.3 , HORVU5Hr1G056930.4 , HORVU5Hr1G056930.5 , HORVU5Hr1G056930.6 , HORVU5Hr1G056930.7 , HORVU5Hr1G056930.8 , HORVU5Hr1G056930.9 , HORVU5Hr1G056930.23 , HORVU5Hr1G056930.22 , HORVU5Hr1G056930.21 , HORVU5Hr1G056930.20 , HORVU5Hr1G056930.27 , HORVU5Hr1G056930.26 , HORVU5Hr1G056930.25 , HORVU5Hr1G056930.24 , HORVU5Hr1G056930.29 , HORVU5Hr1G056930.28 , HORVU5Hr1G056930.30 , HORVU5Hr1G056930.31 , HORVU5Hr1G056930.32 , HORVU5Hr1G056930.33 , HORVU5Hr1G056930.34 , HORVU5Hr1G056930.35 , HORVU5Hr1G056930.36 , HORVU5Hr1G056930.37 , HORVU5Hr1G056930.38 , HORVU5Hr1G056930.39 , HORVU5Hr1G056930.18 , HORVU5Hr1G056930.19 , HORVU5Hr1G056930.12 , HORVU5Hr1G056930.13 , HORVU5Hr1G056930.10 , HORVU5Hr1G056930.11 , HORVU5Hr1G056930.16 , HORVU5Hr1G056930.17 , HORVU5Hr1G056930.14 , HORVU5Hr1G056930.15
Wheat TraesCS5D02G195700 , TraesCS5A02G193200 , TraesCS5B02G188600 , TraesCS5B02G188600 , TraesCS5B02G188600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
2 Sobic.K042000 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
3 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.009G249200 transmembrane protein, putative, expressed -
5 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
6 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
8 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
9 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
10 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
11 Sobic.001G373200 lipase precursor, putative, expressed -
12 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
13 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
14 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
15 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
16 Sobic.001G114000 expressed protein -
17 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
18 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
19 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
20 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase


Gene co-expression network
sample Sobic002G179900 Sobic002G179900 Sobic009G010600 Sobic009G010600 Sobic002G179900--Sobic009G010600 SobicK042000 SobicK042000 Sobic002G179900--SobicK042000 Sobic007G024700 Sobic007G024700 Sobic002G179900--Sobic007G024700 Sobic009G249200 Sobic009G249200 Sobic002G179900--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic002G179900--Sobic004G052900 Sobic004G113400 Sobic004G113400 Sobic002G179900--Sobic004G113400 Sobic006G245400 Sobic006G245400 Sobic002G179900--Sobic006G245400 Sobic007G172400 Sobic007G172400 Sobic002G179900--Sobic007G172400 Sobic002G315200 Sobic002G315200 Sobic002G179900--Sobic002G315200 Sobic009G010600--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic009G010600--Sobic001G474600 Sobic001G178700 Sobic001G178700 Sobic009G010600--Sobic001G178700 Sobic001G058700 Sobic001G058700 Sobic009G010600--Sobic001G058700 Sobic001G281100 Sobic001G281100 Sobic009G010600--Sobic001G281100 Sobic004G355000 Sobic004G355000 Sobic009G010600--Sobic004G355000 Sobic004G329400 Sobic004G329400 Sobic009G010600--Sobic004G329400 Sobic002G427050 Sobic002G427050 Sobic009G010600--Sobic002G427050 Sobic005G026200 Sobic005G026200 Sobic009G010600--Sobic005G026200 Sobic003G280800 Sobic003G280800 SobicK042000--Sobic003G280800 Sobic006G216800 Sobic006G216800 SobicK042000--Sobic006G216800 Sobic006G209850 Sobic006G209850 SobicK042000--Sobic006G209850 Sobic002G053000 Sobic002G053000 SobicK042000--Sobic002G053000 Sobic001G071400 Sobic001G071400 SobicK042000--Sobic001G071400 Sobic008G047800 Sobic008G047800 SobicK042000--Sobic008G047800 Sobic002G006900 Sobic002G006900 SobicK042000--Sobic002G006900 Sobic002G133400 Sobic002G133400 SobicK042000--Sobic002G133400 Sobic009G126400 Sobic009G126400 SobicK042000--Sobic009G126400 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic004G052900--Sobic007G172400 Sobic002G340100 Sobic002G340100 Sobic004G052900--Sobic002G340100 Sobic004G052900--Sobic002G419800 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic004G052900--Sobic009G094300 Sobic004G113400--Sobic009G010600 Sobic003G408600 Sobic003G408600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic002G430000 Sobic002G430000 Sobic004G113400--Sobic002G430000 Sobic006G245400--Sobic002G340100 Sobic006G245400--Sobic007G172400 Sobic006G245400--Sobic004G052900 Sobic006G245400--Sobic004G113400 Sobic001G114000 Sobic001G114000 Sobic006G245400--Sobic001G114000 Sobic006G245400--Sobic006G237400 Sobic007G217000 Sobic007G217000 Sobic006G245400--Sobic007G217000 Sobic001G065000 Sobic001G065000 Sobic006G245400--Sobic001G065000 Sobic006G245400--Sobic001G474600 Sobic007G172400--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic007G172400--Sobic002G071500 Sobic001G050600 Sobic001G050600 Sobic007G172400--Sobic001G050600 Sobic004G347400 Sobic004G347400 Sobic007G172400--Sobic004G347400 Sobic007G172400--Sobic002G419800 Sobic001G219900 Sobic001G219900 Sobic007G172400--Sobic001G219900 Sobic007G172400--Sobic004G113400 Sobic007G172400--Sobic001G474600 Sobic007G172400--Sobic003G408600 Sobic010G153700 Sobic010G153700 Sobic002G315200--Sobic010G153700 Sobic002G315200--Sobic002G006900 Sobic002G315200--Sobic001G071400 Sobic002G315200--Sobic008G047800 Sobic001G220300 Sobic001G220300 Sobic002G315200--Sobic001G220300 Sobic001G512700 Sobic001G512700 Sobic002G315200--Sobic001G512700 Sobic009G191000 Sobic009G191000 Sobic002G315200--Sobic009G191000 Sobic001G290100 Sobic001G290100 Sobic002G315200--Sobic001G290100 Sobic001G497300 Sobic001G497300 Sobic002G315200--Sobic001G497300
Octagon: transcription factors


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