Gene annotation
Transcriptome id Sobic.003G233600.1
Synonym Sb03g029130
Functional annotation aspartyl aminopeptidase, putative, expressed
UniProt C5XEJ7
Pfam PF02127
Panther DB PTHR28570 PTHR28570:SF1
NCBI CDD -
KEGG Orthology K01267; aspartyl aminopeptidase
Gene Ontology GO:0008270; zinc ion binding GO:0006508proteolysis GO:0004177aminopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G60160 : Zn-dependent exopeptidases superfamily protein
RAP-DB (Rice) LOC_Os12g13390.1 : aspartyl aminopeptidase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ91766
Barley HORVU5Hr1G061530.5 , HORVU5Hr1G061530.3 , HORVU5Hr1G061530.1
Wheat TraesCS5D02G215200 , TraesCS5D02G215200 , TraesCS5B02G207200 , TraesCS5B02G207200 , TraesCS5A02G208900 , TraesCS5A02G208900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
2 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
3 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
4 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
5 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.001G000200 TBC domain containing protein, expressed -
7 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
8 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
9 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
10 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
11 Sobic.010G020300 spastin, putative, expressed K13254: spastin
12 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
13 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
14 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
15 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
16 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
17 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
18 Sobic.004G119100 expressed protein -
19 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic003G233600 Sobic003G233600 Sobic004G127700 Sobic004G127700 Sobic003G233600--Sobic004G127700 Sobic002G166300 Sobic002G166300 Sobic003G233600--Sobic002G166300 Sobic009G199200 Sobic009G199200 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic001G079200 Sobic001G079200 Sobic003G233600--Sobic001G079200 Sobic001G000200 Sobic001G000200 Sobic003G233600--Sobic001G000200 Sobic004G296400 Sobic004G296400 Sobic003G233600--Sobic004G296400 Sobic003G273600 Sobic003G273600 Sobic003G233600--Sobic003G273600 Sobic004G136300 Sobic004G136300 Sobic003G233600--Sobic004G136300 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G339100 Sobic004G339100 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G127700--Sobic004G136300 Sobic002G166300--Sobic003G273600 Sobic002G166300--Sobic003G233600 Sobic002G166300--Sobic009G139900 Sobic002G166300--Sobic004G296400 Sobic002G166300--Sobic001G079200 Sobic002G166300--Sobic009G199200 Sobic008G004600 Sobic008G004600 Sobic002G166300--Sobic008G004600 Sobic002G166300--Sobic001G000200 Sobic002G166300--Sobic004G136300 Sobic009G199200--Sobic001G000200 Sobic009G199200--Sobic003G233600 Sobic009G199200--Sobic008G004600 Sobic002G317300 Sobic002G317300 Sobic009G199200--Sobic002G317300 Sobic009G199200--Sobic010G205800 Sobic001G186800 Sobic001G186800 Sobic009G199200--Sobic001G186800 Sobic001G281600 Sobic001G281600 Sobic009G199200--Sobic001G281600 Sobic009G199200--Sobic002G166300 Sobic002G260900 Sobic002G260900 Sobic009G199200--Sobic002G260900 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic001G390800 Sobic001G390800 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic010G205800--Sobic001G079200 Sobic001G079200--Sobic001G390800 Sobic001G079200--Sobic010G205800 Sobic001G079200--Sobic003G233600 Sobic001G241100 Sobic001G241100 Sobic001G079200--Sobic001G241100 Sobic006G126100 Sobic006G126100 Sobic001G079200--Sobic006G126100 Sobic001G079200--Sobic001G007000 Sobic001G079200--Sobic003G273600 Sobic003G169600 Sobic003G169600 Sobic001G079200--Sobic003G169600 Sobic001G079200--Sobic001G000200 Sobic001G000200--Sobic009G199200 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic001G000200--Sobic008G004600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic004G296400--Sobic003G233600 Sobic004G296400--Sobic003G169600 Sobic010G138000 Sobic010G138000 Sobic004G296400--Sobic010G138000 Sobic001G085300 Sobic001G085300 Sobic004G296400--Sobic001G085300 Sobic002G116900 Sobic002G116900 Sobic004G296400--Sobic002G116900 Sobic004G296400--Sobic002G166300 Sobic004G296400--Sobic001G390800 Sobic004G296400--Sobic001G124200 Sobic004G040900 Sobic004G040900 Sobic004G296400--Sobic004G040900 Sobic003G273600--Sobic002G166300 Sobic003G273600--Sobic003G233600 Sobic003G273600--Sobic001G079200 Sobic003G273600--Sobic009G139900 Sobic003G273600--Sobic004G127700 Sobic003G273600--Sobic008G004600 Sobic003G273600--Sobic004G296400 Sobic010G002400 Sobic010G002400 Sobic003G273600--Sobic010G002400 Sobic005G044800 Sobic005G044800 Sobic003G273600--Sobic005G044800 Sobic004G136300--Sobic010G138000 Sobic004G136300--Sobic009G139900 Sobic009G133500 Sobic009G133500 Sobic004G136300--Sobic009G133500 Sobic003G164200 Sobic003G164200 Sobic004G136300--Sobic003G164200 Sobic005G096400 Sobic005G096400 Sobic004G136300--Sobic005G096400 Sobic010G139600 Sobic010G139600 Sobic004G136300--Sobic010G139600 Sobic004G136300--Sobic003G233600 Sobic006G041600 Sobic006G041600 Sobic004G136300--Sobic006G041600 Sobic003G155900 Sobic003G155900 Sobic004G136300--Sobic003G155900
Octagon: transcription factors


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