Gene annotation
Transcriptome id Sobic.004G136300.4,Sobic.004G136300.1,Sobic.004G136300.2,Sobic.004G136300.3
Synonym Sb04g015010, KEU
Functional annotation Sec1 family transport protein, putative, expressed
UniProt A0A194YPH6 , A0A1Z5RME2 , A0A1Z5RMT6 , A0A194YPL1
Pfam PF00995
Panther DB PTHR11679 PTHR11679:SF38
NCBI CDD KOG1300; Vesicle trafficking protein Sec1
KEGG Orthology K15292; STXBP1, syntaxin-binding protein 1
Gene Ontology GO:0016192; vesicle-mediated transport GO:0006904vesicle docking involved in exocytosis


Orthologs (automatic annotation)
TAIR AT1G12360 : Sec1/munc18-like (SM) proteins superfamily
RAP-DB (Rice) LOC_Os02g25580.1 : Sec1 family transport protein, putative, expressed
MaizeGDB (Corn) Zm00025a012007 , Zm00025a019682
Brachypodium KQK14248
Barley HORVU6Hr1G043390.21 , HORVU6Hr1G043390.22 , HORVU6Hr1G043390.18 , HORVU6Hr1G043390.14 , HORVU6Hr1G043390.17 , HORVU6Hr1G043390.16 , HORVU6Hr1G043390.11 , HORVU6Hr1G043390.10 , HORVU6Hr1G043390.13 , HORVU6Hr1G043390.12 , HORVU6Hr1G043390.8 , HORVU6Hr1G043520.1 , HORVU6Hr1G043390.1 , HORVU6Hr1G043530.1 , HORVU6Hr1G043490.2 , HORVU6Hr1G043490.3 , HORVU6Hr1G043490.1 , HORVU6Hr1G043490.4 , HORVU6Hr1G043490.5 , HORVU6Hr1G043390.9 , HORVU6Hr1G043390.3 , HORVU6Hr1G043390.2 , HORVU6Hr1G043390.5 , HORVU6Hr1G043390.4 , HORVU6Hr1G043390.7 , HORVU6Hr1G043390.6 , HORVU6Hr1G043390.15
Wheat TraesCS2D02G060000 , TraesCS2D02G060000 , TraesCS2D02G060000 , TraesCS6B02G231900 , TraesCS6A02G193500 , TraesCS6D02G179600
Populus PNT03408


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
2 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
3 Sobic.009G133500 expressed protein -
4 Sobic.003G164200 cullin, putative, expressed K03347: CUL1, cullin 1
5 Sobic.005G096400 protein kinase domain containing protein, expressed -
6 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
7 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
8 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
9 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
10 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
11 Sobic.004G329400 formin, putative, expressed -
12 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
13 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
14 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
15 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
16 Sobic.003G313500 MATH domain containing protein, expressed -
17 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
18 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
19 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.008G118200 vesicle tethering family protein, putative, expressed -


Gene co-expression network
sample Sobic004G136300 Sobic004G136300 Sobic010G138000 Sobic010G138000 Sobic004G136300--Sobic010G138000 Sobic009G139900 Sobic009G139900 Sobic004G136300--Sobic009G139900 Sobic009G133500 Sobic009G133500 Sobic004G136300--Sobic009G133500 Sobic003G164200 Sobic003G164200 Sobic004G136300--Sobic003G164200 Sobic005G096400 Sobic005G096400 Sobic004G136300--Sobic005G096400 Sobic010G139600 Sobic010G139600 Sobic004G136300--Sobic010G139600 Sobic003G233600 Sobic003G233600 Sobic004G136300--Sobic003G233600 Sobic006G041600 Sobic006G041600 Sobic004G136300--Sobic006G041600 Sobic003G155900 Sobic003G155900 Sobic004G136300--Sobic003G155900 Sobic010G175400 Sobic010G175400 Sobic010G138000--Sobic010G175400 Sobic001G194200 Sobic001G194200 Sobic010G138000--Sobic001G194200 Sobic007G103100 Sobic007G103100 Sobic010G138000--Sobic007G103100 Sobic010G138000--Sobic004G136300 Sobic002G276100 Sobic002G276100 Sobic010G138000--Sobic002G276100 Sobic001G002000 Sobic001G002000 Sobic010G138000--Sobic001G002000 Sobic004G291900 Sobic004G291900 Sobic010G138000--Sobic004G291900 Sobic001G268200 Sobic001G268200 Sobic010G138000--Sobic001G268200 Sobic002G275700 Sobic002G275700 Sobic010G138000--Sobic002G275700 Sobic009G139900--Sobic004G136300 Sobic002G166300 Sobic002G166300 Sobic009G139900--Sobic002G166300 Sobic009G139900--Sobic010G138000 Sobic009G139900--Sobic003G233600 Sobic004G127700 Sobic004G127700 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic003G273600 Sobic003G273600 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic004G065000 Sobic004G065000 Sobic009G133500--Sobic004G065000 Sobic006G204900 Sobic006G204900 Sobic009G133500--Sobic006G204900 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic004G329400 Sobic004G329400 Sobic009G133500--Sobic004G329400 Sobic007G004500 Sobic007G004500 Sobic009G133500--Sobic007G004500 Sobic007G075400 Sobic007G075400 Sobic009G133500--Sobic007G075400 Sobic008G118200 Sobic008G118200 Sobic003G164200--Sobic008G118200 Sobic001G392300 Sobic001G392300 Sobic003G164200--Sobic001G392300 Sobic008G089100 Sobic008G089100 Sobic003G164200--Sobic008G089100 Sobic009G088000 Sobic009G088000 Sobic003G164200--Sobic009G088000 Sobic004G039600 Sobic004G039600 Sobic003G164200--Sobic004G039600 Sobic003G164200--Sobic006G041600 Sobic002G133300 Sobic002G133300 Sobic003G164200--Sobic002G133300 Sobic010G275500 Sobic010G275500 Sobic003G164200--Sobic010G275500 Sobic010G112100 Sobic010G112100 Sobic003G164200--Sobic010G112100 Sobic005G096400--Sobic004G136300 Sobic001G004400 Sobic001G004400 Sobic005G096400--Sobic001G004400 Sobic005G096400--Sobic003G164200 Sobic001G016600 Sobic001G016600 Sobic005G096400--Sobic001G016600 Sobic005G096400--Sobic010G138000 Sobic009G094900 Sobic009G094900 Sobic005G096400--Sobic009G094900 Sobic001G334700 Sobic001G334700 Sobic005G096400--Sobic001G334700 Sobic006G036100 Sobic006G036100 Sobic005G096400--Sobic006G036100 Sobic010G181200 Sobic010G181200 Sobic005G096400--Sobic010G181200 Sobic010G139600--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic003G313500 Sobic003G313500 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic010G139600--Sobic001G194200 Sobic003G422500 Sobic003G422500 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic003G233600--Sobic004G127700 Sobic003G233600--Sobic002G166300 Sobic009G199200 Sobic009G199200 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic001G079200 Sobic001G079200 Sobic003G233600--Sobic001G079200 Sobic001G000200 Sobic001G000200 Sobic003G233600--Sobic001G000200 Sobic004G296400 Sobic004G296400 Sobic003G233600--Sobic004G296400 Sobic003G233600--Sobic003G273600 Sobic003G233600--Sobic004G136300 Sobic006G041600--Sobic001G194200 Sobic001G433800 Sobic001G433800 Sobic006G041600--Sobic001G433800 Sobic006G041600--Sobic004G291900 Sobic006G252900 Sobic006G252900 Sobic006G041600--Sobic006G252900 Sobic006G041600--Sobic001G002000 Sobic001G289800 Sobic001G289800 Sobic006G041600--Sobic001G289800 Sobic006G041600--Sobic002G133300 Sobic004G185800 Sobic004G185800 Sobic006G041600--Sobic004G185800 Sobic001G207000 Sobic001G207000 Sobic006G041600--Sobic001G207000 Sobic003G352200 Sobic003G352200 Sobic003G155900--Sobic003G352200 Sobic007G163100 Sobic007G163100 Sobic003G155900--Sobic007G163100 Sobic001G124200 Sobic001G124200 Sobic003G155900--Sobic001G124200 Sobic006G012500 Sobic006G012500 Sobic003G155900--Sobic006G012500 Sobic003G155900--Sobic001G392300 Sobic002G262900 Sobic002G262900 Sobic003G155900--Sobic002G262900 Sobic003G155900--Sobic010G205800 Sobic003G422900 Sobic003G422900 Sobic003G155900--Sobic003G422900 Sobic002G045600 Sobic002G045600 Sobic003G155900--Sobic002G045600
Octagon: transcription factors


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