Gene annotation
Transcriptome id Sobic.009G133500.2
Synonym ATATG18G, ATG18G, Sb09g019970
Functional annotation expressed protein
UniProt A0A1Z5R2H2
Pfam PF12490
Panther DB PTHR13268 PTHR13268:SF0
NCBI CDD KOG2109; WD40 repeat protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54710 : homolog of yeast autophagy 18 (ATG18) H
RAP-DB (Rice) LOC_Os05g33610.2 : expressed protein
MaizeGDB (Corn) Zm00025a043651 , Zm00025a037482
Brachypodium PNT71283 , PNT71284
Barley HORVU1Hr1G061010.1 , HORVU1Hr1G061010.2 , HORVU1Hr1G061010.5 , HORVU1Hr1G061010.4 , HORVU1Hr1G061010.6 , HORVU1Hr1G061010.3
Wheat TraesCS1D02G253700 , TraesCS1D02G253700 , TraesCS1B02G264000 , TraesCS1B02G264000 , TraesCS1A02G254200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G065000 expressed protein -
2 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
3 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
4 Sobic.002G147600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
5 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
6 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
7 Sobic.004G329400 formin, putative, expressed -
8 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
9 Sobic.007G075400 expressed protein -
10 Sobic.004G068400 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
11 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
12 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
13 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
14 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
15 Sobic.004G177300 SPRY-domain containing protein, putative, expressed -
16 Sobic.005G157000 expressed protein -
17 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
19 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
20 Sobic.007G133700 expressed protein -


Gene co-expression network
sample Sobic009G133500 Sobic009G133500 Sobic004G065000 Sobic004G065000 Sobic009G133500--Sobic004G065000 Sobic006G204900 Sobic006G204900 Sobic009G133500--Sobic006G204900 Sobic010G139600 Sobic010G139600 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic004G136300 Sobic004G136300 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic004G329400 Sobic004G329400 Sobic009G133500--Sobic004G329400 Sobic007G004500 Sobic007G004500 Sobic009G133500--Sobic007G004500 Sobic007G075400 Sobic007G075400 Sobic009G133500--Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300 Sobic003G322700 Sobic003G322700 Sobic006G204900--Sobic003G322700 Sobic001G207400 Sobic001G207400 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic010G139600--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic003G313500 Sobic003G313500 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic003G422500 Sobic003G422500 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic002G147600--Sobic008G092600 Sobic002G147600--Sobic008G098900 Sobic004G040500 Sobic004G040500 Sobic002G147600--Sobic004G040500 Sobic008G085300 Sobic008G085300 Sobic002G147600--Sobic008G085300 Sobic002G147600--Sobic002G146300 Sobic002G335600 Sobic002G335600 Sobic002G147600--Sobic002G335600 Sobic002G147600--Sobic007G133700 Sobic002G147600--Sobic003G205200 Sobic002G147600--Sobic001G370900 Sobic010G138000 Sobic010G138000 Sobic004G136300--Sobic010G138000 Sobic009G139900 Sobic009G139900 Sobic004G136300--Sobic009G139900 Sobic004G136300--Sobic009G133500 Sobic003G164200 Sobic003G164200 Sobic004G136300--Sobic003G164200 Sobic005G096400 Sobic005G096400 Sobic004G136300--Sobic005G096400 Sobic004G136300--Sobic010G139600 Sobic003G233600 Sobic003G233600 Sobic004G136300--Sobic003G233600 Sobic006G041600 Sobic006G041600 Sobic004G136300--Sobic006G041600 Sobic003G155900 Sobic003G155900 Sobic004G136300--Sobic003G155900 Sobic007G098500 Sobic007G098500 Sobic008G092600--Sobic007G098500 Sobic008G092600--Sobic002G147600 Sobic001G137000 Sobic001G137000 Sobic008G092600--Sobic001G137000 Sobic008G092600--Sobic004G040500 Sobic003G072200 Sobic003G072200 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G092600--Sobic008G085300 Sobic003G233400 Sobic003G233400 Sobic008G092600--Sobic003G233400 Sobic001G117200 Sobic001G117200 Sobic008G092600--Sobic001G117200 Sobic004G113400 Sobic004G113400 Sobic004G329400--Sobic004G113400 Sobic009G027300 Sobic009G027300 Sobic004G329400--Sobic009G027300 Sobic005G157000 Sobic005G157000 Sobic004G329400--Sobic005G157000 Sobic001G058700 Sobic001G058700 Sobic004G329400--Sobic001G058700 Sobic004G329400--Sobic004G355000 Sobic004G329400--Sobic004G269200 Sobic007G024700 Sobic007G024700 Sobic004G329400--Sobic007G024700 Sobic007G172400 Sobic007G172400 Sobic004G329400--Sobic007G172400 Sobic003G408600 Sobic003G408600 Sobic004G329400--Sobic003G408600 Sobic002G266000 Sobic002G266000 Sobic007G004500--Sobic002G266000 Sobic007G004500--Sobic002G430000 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic007G004500--Sobic010G139600 Sobic007G004500--Sobic004G065000 Sobic007G004500--Sobic009G133500 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic002G008900 Sobic002G008900 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic007G075400--Sobic003G313500 Sobic007G075400--Sobic004G065000
Octagon: transcription factors


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