Gene annotation
Transcriptome id Sobic.004G177300.1
Synonym
Functional annotation SPRY-domain containing protein, putative, expressed
UniProt A0A194YQB4
Pfam PF00622
Panther DB PTHR12864
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G09340 : SPla/RYanodine receptor (SPRY) domain-containing protein
RAP-DB (Rice) LOC_Os02g35070.1 : SPRY-domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020672 , Zm00025a031604
Brachypodium KQJ99888 , KQJ99827
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G177300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
2 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
3 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
4 Sobic.004G065000 expressed protein -
5 Sobic.010G020300 spastin, putative, expressed K13254: spastin
6 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
7 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.009G133500 expressed protein -
9 Sobic.002G263600 expressed protein -
10 Sobic.007G075400 expressed protein -
11 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
12 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
13 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G164000 FYVE zinc finger domain containing protein, expressed -
15 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
16 Sobic.010G278200 expressed protein -
17 Sobic.003G195000 OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed K08955: ATP-dependent metalloprotease
18 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
19 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
20 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein


Gene co-expression network
sample Sobic004G177300 Sobic004G177300 Sobic002G008800 Sobic002G008800 Sobic004G177300--Sobic002G008800 Sobic003G089000 Sobic003G089000 Sobic004G177300--Sobic003G089000 Sobic002G262900 Sobic002G262900 Sobic004G177300--Sobic002G262900 Sobic004G065000 Sobic004G065000 Sobic004G177300--Sobic004G065000 Sobic010G020300 Sobic010G020300 Sobic004G177300--Sobic010G020300 Sobic010G261600 Sobic010G261600 Sobic004G177300--Sobic010G261600 Sobic005G059600 Sobic005G059600 Sobic004G177300--Sobic005G059600 Sobic009G133500 Sobic009G133500 Sobic004G177300--Sobic009G133500 Sobic002G263600 Sobic002G263600 Sobic004G177300--Sobic002G263600 Sobic002G008800--Sobic010G261600 Sobic010G020400 Sobic010G020400 Sobic002G008800--Sobic010G020400 Sobic002G008800--Sobic002G262900 Sobic010G223300 Sobic010G223300 Sobic002G008800--Sobic010G223300 Sobic001G382600 Sobic001G382600 Sobic002G008800--Sobic001G382600 Sobic002G008800--Sobic004G177300 Sobic004G275700 Sobic004G275700 Sobic002G008800--Sobic004G275700 Sobic001G333100 Sobic001G333100 Sobic002G008800--Sobic001G333100 Sobic008G055900 Sobic008G055900 Sobic002G008800--Sobic008G055900 Sobic003G089000--Sobic004G177300 Sobic006G032300 Sobic006G032300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic010G072800 Sobic010G072800 Sobic003G089000--Sobic010G072800 Sobic001G273700 Sobic001G273700 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic001G375600 Sobic001G375600 Sobic003G089000--Sobic001G375600 Sobic007G000200 Sobic007G000200 Sobic003G089000--Sobic007G000200 Sobic002G262900--Sobic002G008800 Sobic002G262900--Sobic004G275700 Sobic010G164000 Sobic010G164000 Sobic002G262900--Sobic010G164000 Sobic006G136400 Sobic006G136400 Sobic002G262900--Sobic006G136400 Sobic004G039600 Sobic004G039600 Sobic002G262900--Sobic004G039600 Sobic010G205800 Sobic010G205800 Sobic002G262900--Sobic010G205800 Sobic002G262900--Sobic010G261600 Sobic003G155900 Sobic003G155900 Sobic002G262900--Sobic003G155900 Sobic001G124200 Sobic001G124200 Sobic002G262900--Sobic001G124200 Sobic007G075400 Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic010G139600 Sobic010G139600 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300 Sobic010G020300--Sobic001G124200 Sobic010G020300--Sobic010G205800 Sobic010G020300--Sobic004G065000 Sobic001G390800 Sobic001G390800 Sobic010G020300--Sobic001G390800 Sobic003G352200 Sobic003G352200 Sobic010G020300--Sobic003G352200 Sobic010G020300--Sobic004G177300 Sobic010G278200 Sobic010G278200 Sobic010G020300--Sobic010G278200 Sobic001G227400 Sobic001G227400 Sobic010G020300--Sobic001G227400 Sobic001G121200 Sobic001G121200 Sobic010G020300--Sobic001G121200 Sobic003G338500 Sobic003G338500 Sobic010G261600--Sobic003G338500 Sobic002G303600 Sobic002G303600 Sobic010G261600--Sobic002G303600 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic004G323700 Sobic004G323700 Sobic010G261600--Sobic004G323700 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic010G261600--Sobic004G275700 Sobic010G261600--Sobic010G020400 Sobic004G351300 Sobic004G351300 Sobic005G059600--Sobic004G351300 Sobic006G271200 Sobic006G271200 Sobic005G059600--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic005G059600--Sobic002G270500 Sobic006G237900 Sobic006G237900 Sobic005G059600--Sobic006G237900 Sobic005G059600--Sobic004G177300 Sobic005G059600--Sobic010G261600 Sobic005G059600--Sobic004G228800 Sobic005G059600--Sobic001G273700 Sobic004G016000 Sobic004G016000 Sobic005G059600--Sobic004G016000 Sobic009G133500--Sobic004G065000 Sobic006G204900 Sobic006G204900 Sobic009G133500--Sobic006G204900 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic004G136300 Sobic004G136300 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic004G329400 Sobic004G329400 Sobic009G133500--Sobic004G329400 Sobic007G004500 Sobic007G004500 Sobic009G133500--Sobic007G004500 Sobic009G133500--Sobic007G075400 Sobic002G263600--Sobic002G142900 Sobic002G263600--Sobic010G020400 Sobic010G131900 Sobic010G131900 Sobic002G263600--Sobic010G131900 Sobic009G075800 Sobic009G075800 Sobic002G263600--Sobic009G075800 Sobic003G046300 Sobic003G046300 Sobic002G263600--Sobic003G046300 Sobic009G222500 Sobic009G222500 Sobic002G263600--Sobic009G222500 Sobic001G014800 Sobic001G014800 Sobic002G263600--Sobic001G014800 Sobic006G196300 Sobic006G196300 Sobic002G263600--Sobic006G196300 Sobic002G263600--Sobic002G008800
Octagon: transcription factors


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