Gene annotation
Transcriptome id Sobic.004G065000.1
Synonym Sb04g005420
Functional annotation expressed protein
UniProt C5XWU8
Pfam PF10377
Panther DB PTHR13222 PTHR13222:SF1
NCBI CDD KOG4572; Predicted DNA-binding transcription factor, interacts with stathmin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30790 : -
RAP-DB (Rice) LOC_Os02g08350.1 : expressed protein
MaizeGDB (Corn) Zm00025a034737 , Zm00025a053061 , Zm00025a019208
Brachypodium KQJ93644 , KQJ93645 , KQJ93646
Barley HORVU6Hr1G029550.5 , HORVU6Hr1G029550.3 , HORVU6Hr1G029550.2 , HORVU6Hr1G029550.1
Wheat TraesCS6D02G138400 , TraesCS6B02G177000 , TraesCS6B02G177000 , TraesCS6A02G149000 , TraesCS6A02G149000 , TraesCS6D02G138400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075400 expressed protein -
2 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
3 Sobic.009G133500 expressed protein -
4 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
5 Sobic.007G133700 expressed protein -
6 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
7 Sobic.001G313700 expressed protein -
8 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
9 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
10 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
11 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.010G020300 spastin, putative, expressed K13254: spastin
14 Sobic.004G177300 SPRY-domain containing protein, putative, expressed -
15 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
16 Sobic.001G289600 BAH domain containing protein, putative, expressed -
17 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
18 Sobic.004G329400 formin, putative, expressed -
19 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
20 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic004G065000 Sobic004G065000 Sobic007G075400 Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic009G133500 Sobic009G133500 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic010G139600 Sobic010G139600 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic002G008900 Sobic002G008900 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic003G422500 Sobic003G422500 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic007G075400--Sobic004G065000 Sobic004G331100--Sobic007G075400 Sobic009G027300 Sobic009G027300 Sobic004G331100--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic004G331100--Sobic002G419800 Sobic003G101400 Sobic003G101400 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic001G050200 Sobic001G050200 Sobic004G331100--Sobic001G050200 Sobic004G347400 Sobic004G347400 Sobic004G331100--Sobic004G347400 Sobic003G118200 Sobic003G118200 Sobic004G331100--Sobic003G118200 Sobic004G331100--Sobic004G065000 Sobic009G133500--Sobic004G065000 Sobic006G204900 Sobic006G204900 Sobic009G133500--Sobic006G204900 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic004G136300 Sobic004G136300 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic004G329400 Sobic004G329400 Sobic009G133500--Sobic004G329400 Sobic007G004500 Sobic007G004500 Sobic009G133500--Sobic007G004500 Sobic009G133500--Sobic007G075400 Sobic003G408600 Sobic003G408600 Sobic007G163100--Sobic003G408600 Sobic008G118200 Sobic008G118200 Sobic007G163100--Sobic008G118200 Sobic002G045600 Sobic002G045600 Sobic007G163100--Sobic002G045600 Sobic001G117200 Sobic001G117200 Sobic007G163100--Sobic001G117200 Sobic003G072200 Sobic003G072200 Sobic007G163100--Sobic003G072200 Sobic007G163100--Sobic003G422500 Sobic001G540400 Sobic001G540400 Sobic007G163100--Sobic001G540400 Sobic001G289800 Sobic001G289800 Sobic007G163100--Sobic001G289800 Sobic004G113400 Sobic004G113400 Sobic007G163100--Sobic004G113400 Sobic007G133700--Sobic003G422500 Sobic007G133700--Sobic009G053900 Sobic007G133700--Sobic002G146300 Sobic008G098900 Sobic008G098900 Sobic007G133700--Sobic008G098900 Sobic007G172200 Sobic007G172200 Sobic007G133700--Sobic007G172200 Sobic001G370900 Sobic001G370900 Sobic007G133700--Sobic001G370900 Sobic007G133700--Sobic007G075400 Sobic003G196300 Sobic003G196300 Sobic007G133700--Sobic003G196300 Sobic007G133700--Sobic001G273700 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic010G139600--Sobic001G370900 Sobic003G360400 Sobic003G360400 Sobic001G313700--Sobic003G360400 Sobic001G313700--Sobic002G045600 Sobic009G044800 Sobic009G044800 Sobic001G313700--Sobic009G044800 Sobic010G112100 Sobic010G112100 Sobic001G313700--Sobic010G112100 Sobic001G313700--Sobic003G408600 Sobic001G313700--Sobic001G273700 Sobic002G154000 Sobic002G154000 Sobic001G313700--Sobic002G154000 Sobic008G099800 Sobic008G099800 Sobic001G313700--Sobic008G099800 Sobic001G457900 Sobic001G457900 Sobic001G313700--Sobic001G457900 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic001G273700--Sobic007G133700 Sobic001G273700--Sobic007G163100 Sobic001G273700--Sobic001G457900 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic001G390800 Sobic001G390800 Sobic001G085300--Sobic001G390800 Sobic001G085300--Sobic003G313500 Sobic001G085300--Sobic001G117200 Sobic003G110000 Sobic003G110000 Sobic001G085300--Sobic003G110000 Sobic001G085300--Sobic003G422500 Sobic001G415300 Sobic001G415300 Sobic001G085300--Sobic001G415300 Sobic001G085300--Sobic010G139600 Sobic001G085300--Sobic003G196300 Sobic001G268200 Sobic001G268200 Sobic001G085300--Sobic001G268200
Octagon: transcription factors


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