Gene annotation
Transcriptome id Sobic.006G204900.1
Synonym YAK1
Functional annotation protein kinase, putative, expressed
UniProt A0A1B6PMY5
Pfam PF07714
Panther DB PTHR24058 PTHR24058:SF64
NCBI CDD KOG0667; Dual-specificity tyrosine-phosphorylation regulated kinase
KEGG Orthology K18670; dual specificity protein kinase YAK1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G35980 : yeast YAK1-related gene 1
RAP-DB (Rice) LOC_Os04g51370.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a056952 , Zm00025a009917
Brachypodium KQJ84427
Barley -
Wheat TraesCS2B02G456400 , TraesCS2B02G456400 , TraesCS2B02G456400 , TraesCS2B02G456400 , TraesCS2A02G436800 , TraesCS2A02G436800 , TraesCS2D02G433100 , TraesCS2D02G433100 , TraesCS2D02G433100 , TraesCS2D02G433100 , TraesCS2B02G456400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G322700 expressed protein -
2 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
3 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
4 Sobic.009G133500 expressed protein -
5 Sobic.010G001500 AML1, putative, expressed -
6 Sobic.004G068400 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
7 Sobic.004G355000 SAC9, putative, expressed -
8 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
10 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
11 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
12 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
13 Sobic.007G075400 expressed protein -
14 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
15 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
17 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
18 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
19 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4


Gene co-expression network
sample Sobic006G204900 Sobic006G204900 Sobic003G322700 Sobic003G322700 Sobic006G204900--Sobic003G322700 Sobic001G207400 Sobic001G207400 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic002G266000 Sobic002G266000 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic003G322700--Sobic010G001500 Sobic003G322700--Sobic004G355000 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic004G034600 Sobic004G034600 Sobic003G322700--Sobic004G034600 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic009G027300 Sobic009G027300 Sobic004G269200--Sobic009G027300 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic004G065000 Sobic004G065000 Sobic009G133500--Sobic004G065000 Sobic009G133500--Sobic006G204900 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic004G136300 Sobic004G136300 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic009G133500--Sobic004G329400 Sobic007G004500 Sobic007G004500 Sobic009G133500--Sobic007G004500 Sobic007G075400 Sobic007G075400 Sobic009G133500--Sobic007G075400 Sobic010G001500--Sobic003G322700 Sobic007G024700 Sobic007G024700 Sobic010G001500--Sobic007G024700 Sobic010G001500--Sobic004G355000 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic010G001500--Sobic001G207400 Sobic001G178700 Sobic001G178700 Sobic010G001500--Sobic001G178700 Sobic001G146800 Sobic001G146800 Sobic010G001500--Sobic001G146800 Sobic004G068400--Sobic006G204900 Sobic004G068400--Sobic009G133500 Sobic008G098900 Sobic008G098900 Sobic004G068400--Sobic008G098900 Sobic010G210500 Sobic010G210500 Sobic004G068400--Sobic010G210500 Sobic001G370900 Sobic001G370900 Sobic004G068400--Sobic001G370900 Sobic003G110000 Sobic003G110000 Sobic004G068400--Sobic003G110000 Sobic004G266400 Sobic004G266400 Sobic004G068400--Sobic004G266400 Sobic007G172200 Sobic007G172200 Sobic004G068400--Sobic007G172200 Sobic004G068400--Sobic001G207400 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic001G248300 Sobic001G248300 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G113400 Sobic004G113400 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic002G430000--Sobic008G092600 Sobic002G430000--Sobic003G110000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.