Gene annotation
Transcriptome id Sobic.006G125400.1
Synonym Sb06g020560
Functional annotation steroid nuclear receptor, ligand-binding, putative, expressed
UniProt C5YAV9
Pfam -
Panther DB PTHR31133 PTHR31133:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40640 : -
RAP-DB (Rice) LOC_Os04g40700.1 : steroid nuclear receptor, ligand-binding, putative, expressed
MaizeGDB (Corn) Zm00025a010613 , Zm00025a034348 , Zm00025a019141 , Zm00025a021293 , Zm00025a010964
Brachypodium KQJ83214
Barley HORVU2Hr1G083710.11 , HORVU2Hr1G083710.10 , HORVU2Hr1G083710.13 , HORVU2Hr1G083710.12 , HORVU2Hr1G083710.5 , HORVU2Hr1G083710.4 , HORVU2Hr1G083710.7 , HORVU2Hr1G083710.6 , HORVU2Hr1G083710.1 , HORVU2Hr1G083710.3 , HORVU2Hr1G083710.2 , HORVU2Hr1G083710.9 , HORVU2Hr1G083710.8
Wheat TraesCS2D02G341900 , TraesCS6D02G194500 , TraesCS2A02G321600 , TraesCS2B02G360900
Populus -


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cDNA sequences
Sobic.006G125400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
2 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
4 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
5 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
6 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
8 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
9 Sobic.002G009700 AMP-binding domain containing protein, expressed -
10 Sobic.004G004200 expressed protein -
11 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
12 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
13 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
14 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
15 Sobic.003G101850 - -
16 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
17 Sobic.001G375600 transmembrane protein, putative, expressed -
18 Sobic.003G322700 expressed protein -
19 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
20 Sobic.005G157000 expressed protein -


Gene co-expression network
sample Sobic006G125400 Sobic006G125400 Sobic006G204900 Sobic006G204900 Sobic006G125400--Sobic006G204900 Sobic010G043400 Sobic010G043400 Sobic006G125400--Sobic010G043400 Sobic004G269200 Sobic004G269200 Sobic006G125400--Sobic004G269200 Sobic010G107000 Sobic010G107000 Sobic006G125400--Sobic010G107000 Sobic001G207400 Sobic001G207400 Sobic006G125400--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic006G125400--Sobic003G355600 Sobic006G271200 Sobic006G271200 Sobic006G125400--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic006G125400--Sobic006G214200 Sobic002G009700 Sobic002G009700 Sobic006G125400--Sobic002G009700 Sobic003G322700 Sobic003G322700 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic009G126900 Sobic009G126900 Sobic010G043400--Sobic009G126900 Sobic004G124200 Sobic004G124200 Sobic010G043400--Sobic004G124200 Sobic010G043400--Sobic002G009700 Sobic010G018100 Sobic010G018100 Sobic010G043400--Sobic010G018100 Sobic010G043400--Sobic003G355600 Sobic010G043400--Sobic006G271200 Sobic010G043400--Sobic010G107000 Sobic010G043400--Sobic006G204900 Sobic010G043400--Sobic006G125400 Sobic009G027300 Sobic009G027300 Sobic004G269200--Sobic009G027300 Sobic001G050200 Sobic001G050200 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic005G157000 Sobic005G157000 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic009G211400 Sobic009G211400 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic009G193700 Sobic009G193700 Sobic010G107000--Sobic009G193700 Sobic010G107000--Sobic003G355600 Sobic003G219600 Sobic003G219600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic009G029600 Sobic009G029600 Sobic010G107000--Sobic009G029600 Sobic009G226300 Sobic009G226300 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic001G207400--Sobic006G204900 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic001G207400--Sobic003G322700 Sobic001G207400--Sobic001G050200 Sobic008G062200 Sobic008G062200 Sobic003G355600--Sobic008G062200 Sobic003G355600--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G355600--Sobic002G304000 Sobic003G355600--Sobic009G226300 Sobic003G355600--Sobic010G107000 Sobic006G199000 Sobic006G199000 Sobic003G355600--Sobic006G199000 Sobic003G355600--Sobic002G009700 Sobic003G355600--Sobic009G193700 Sobic004G101900 Sobic004G101900 Sobic003G355600--Sobic004G101900 Sobic001G003000 Sobic001G003000 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic003G257100 Sobic003G257100 Sobic006G214200--Sobic003G257100 Sobic006G214200--Sobic009G029600 Sobic006G214200--Sobic010G107000 Sobic008G153400 Sobic008G153400 Sobic006G214200--Sobic008G153400 Sobic006G214200--Sobic003G355600 Sobic006G214200--Sobic009G211400 Sobic006G214200--Sobic006G199000 Sobic006G214200--Sobic006G204900 Sobic006G214200--Sobic003G138200 Sobic002G009700--Sobic003G355600 Sobic002G009700--Sobic009G126900 Sobic002G009700--Sobic010G043400 Sobic002G009700--Sobic008G062200 Sobic002G009700--Sobic003G322700 Sobic003G329400 Sobic003G329400 Sobic002G009700--Sobic003G329400 Sobic002G009700--Sobic006G204900 Sobic002G009700--Sobic009G193700 Sobic007G024700 Sobic007G024700 Sobic002G009700--Sobic007G024700
Octagon: transcription factors


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