Gene annotation
Transcriptome id Sobic.001G375600.3
Synonym Sb01g035670
Functional annotation transmembrane protein, putative, expressed
UniProt C5X0N3
Pfam PF03619
Panther DB PTHR23423 PTHR23423:SF27
NCBI CDD KOG2641; Predicted seven transmembrane receptor - rhodopsin family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77220 : Protein of unknown function (DUF300)
RAP-DB (Rice) LOC_Os05g44080.1 : transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a052396
Brachypodium -
Barley HORVU4Hr1G047790.9 , HORVU4Hr1G047790.8 , HORVU4Hr1G047790.7 , HORVU4Hr1G047790.6 , HORVU4Hr1G047790.5 , HORVU4Hr1G047790.4 , HORVU4Hr1G047790.3 , HORVU4Hr1G047790.2 , HORVU4Hr1G047790.16 , HORVU4Hr1G047790.15 , HORVU4Hr1G047790.14 , HORVU4Hr1G047790.13 , HORVU4Hr1G047790.12 , HORVU4Hr1G047790.11 , HORVU4Hr1G047790.10 , HORVU4Hr1G047790.1
Wheat TraesCS4A02G157600 , TraesCS4A02G157600 , TraesCS4B02G155300 , TraesCS4B02G155300 , TraesCS4D02G168300 , TraesCS4D02G168300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G007100 expressed protein -
2 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
3 Sobic.009G165400 lipin, N-terminal conserved region family protein, expressed K15728: phosphatidate phosphatase LPIN
4 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
5 Sobic.007G088100 phosphatidylinositol 3-kinase, root isoform, putative, expressed K00914: PIK3C3, phosphatidylinositol 3-kinase
6 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
7 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
8 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
9 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
10 Sobic.010G034000 zinc carboxypeptidase family protein, putative, expressed K07752: carboxypeptidase D
11 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
12 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
13 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
14 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
15 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
16 Sobic.008G099800 expressed protein -
17 Sobic.004G123400 MYB family transcription factor, putative, expressed K09420: MYB, transcriptional activator Myb
18 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
19 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
20 Sobic.001G313700 expressed protein -


Gene co-expression network
sample Sobic001G375600 Sobic001G375600 Sobic001G007100 Sobic001G007100 Sobic001G375600--Sobic001G007100 Sobic010G072800 Sobic010G072800 Sobic001G375600--Sobic010G072800 Sobic009G165400 Sobic009G165400 Sobic001G375600--Sobic009G165400 Sobic001G273700 Sobic001G273700 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic003G089000 Sobic003G089000 Sobic001G375600--Sobic003G089000 Sobic004G269200 Sobic004G269200 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic006G204900 Sobic006G204900 Sobic001G375600--Sobic006G204900 Sobic001G007100--Sobic001G375600 Sobic009G027300 Sobic009G027300 Sobic001G007100--Sobic009G027300 Sobic002G045600 Sobic002G045600 Sobic001G007100--Sobic002G045600 Sobic007G075400 Sobic007G075400 Sobic001G007100--Sobic007G075400 Sobic001G313700 Sobic001G313700 Sobic001G007100--Sobic001G313700 Sobic001G007100--Sobic010G072800 Sobic010G139600 Sobic010G139600 Sobic001G007100--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic001G007100--Sobic004G065000 Sobic001G207400 Sobic001G207400 Sobic001G007100--Sobic001G207400 Sobic010G072800--Sobic001G375600 Sobic006G271200 Sobic006G271200 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic010G072800--Sobic006G204900 Sobic010G072800--Sobic004G269200 Sobic009G165400--Sobic004G269200 Sobic009G165400--Sobic001G375600 Sobic009G165400--Sobic001G273700 Sobic008G099800 Sobic008G099800 Sobic009G165400--Sobic008G099800 Sobic009G165400--Sobic001G313700 Sobic009G165400--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic009G165400--Sobic002G419800 Sobic008G167800 Sobic008G167800 Sobic009G165400--Sobic008G167800 Sobic009G165400--Sobic001G007100 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic007G088100--Sobic001G273700 Sobic007G088100--Sobic001G375600 Sobic007G088100--Sobic007G172200 Sobic007G088100--Sobic003G259100 Sobic007G088100--Sobic004G065000 Sobic006G037700 Sobic006G037700 Sobic007G088100--Sobic006G037700 Sobic006G126500 Sobic006G126500 Sobic007G088100--Sobic006G126500 Sobic007G088100--Sobic010G072800 Sobic007G088100--Sobic006G204900 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic006G032300 Sobic006G032300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic003G089000--Sobic010G072800 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic003G089000--Sobic001G263600 Sobic003G089000--Sobic001G375600 Sobic007G000200 Sobic007G000200 Sobic003G089000--Sobic007G000200 Sobic004G269200--Sobic009G027300 Sobic001G050200 Sobic001G050200 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic005G157000 Sobic005G157000 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic004G113400 Sobic004G113400 Sobic003G259100--Sobic004G113400 Sobic003G259100--Sobic008G099800 Sobic001G050600 Sobic001G050600 Sobic003G259100--Sobic001G050600 Sobic003G072200 Sobic003G072200 Sobic003G259100--Sobic003G072200 Sobic003G259100--Sobic001G273700 Sobic001G058700 Sobic001G058700 Sobic003G259100--Sobic001G058700 Sobic003G259100--Sobic001G347500 Sobic001G219900 Sobic001G219900 Sobic003G259100--Sobic001G219900 Sobic010G034000 Sobic010G034000 Sobic003G259100--Sobic010G034000 Sobic003G322700 Sobic003G322700 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic006G204900--Sobic002G430000
Octagon: transcription factors


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