Gene annotation
Transcriptome id Sobic.001G007100.1,Sobic.001G007100.2
Synonym TRFL10
Functional annotation expressed protein
UniProt A0A1B6QGP5 , A0A1B6QGP8
Pfam -
Panther DB PTHR21717 PTHR21717:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03780 : TRF-like 10
RAP-DB (Rice) LOC_Os11g06190.1 : expressed protein
MaizeGDB (Corn) Zm00025a016307 , Zm00025a018553
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G007100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375600 transmembrane protein, putative, expressed -
2 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
3 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
4 Sobic.007G075400 expressed protein -
5 Sobic.001G313700 expressed protein -
6 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
7 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
8 Sobic.004G065000 expressed protein -
9 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
10 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
11 Sobic.004G209800 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
12 Sobic.007G060201 - -
13 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
14 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
15 Sobic.001G457900 expressed protein -
16 Sobic.009G165400 lipin, N-terminal conserved region family protein, expressed K15728: phosphatidate phosphatase LPIN
17 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
18 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
19 Sobic.001G050200 expressed protein -
20 Sobic.003G110000 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic001G007100 Sobic001G007100 Sobic001G375600 Sobic001G375600 Sobic001G007100--Sobic001G375600 Sobic009G027300 Sobic009G027300 Sobic001G007100--Sobic009G027300 Sobic002G045600 Sobic002G045600 Sobic001G007100--Sobic002G045600 Sobic007G075400 Sobic007G075400 Sobic001G007100--Sobic007G075400 Sobic001G313700 Sobic001G313700 Sobic001G007100--Sobic001G313700 Sobic010G072800 Sobic010G072800 Sobic001G007100--Sobic010G072800 Sobic010G139600 Sobic010G139600 Sobic001G007100--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic001G007100--Sobic004G065000 Sobic001G207400 Sobic001G207400 Sobic001G007100--Sobic001G207400 Sobic001G375600--Sobic001G007100 Sobic001G375600--Sobic010G072800 Sobic009G165400 Sobic009G165400 Sobic001G375600--Sobic009G165400 Sobic001G273700 Sobic001G273700 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic003G089000 Sobic003G089000 Sobic001G375600--Sobic003G089000 Sobic004G269200 Sobic004G269200 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic006G204900 Sobic006G204900 Sobic001G375600--Sobic006G204900 Sobic008G132600 Sobic008G132600 Sobic009G027300--Sobic008G132600 Sobic009G027300--Sobic002G045600 Sobic004G331100 Sobic004G331100 Sobic009G027300--Sobic004G331100 Sobic003G422500 Sobic003G422500 Sobic009G027300--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic009G027300--Sobic002G008900 Sobic003G101400 Sobic003G101400 Sobic009G027300--Sobic003G101400 Sobic001G050200 Sobic001G050200 Sobic009G027300--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic009G027300--Sobic009G191000 Sobic009G027300--Sobic007G075400 Sobic003G408600 Sobic003G408600 Sobic002G045600--Sobic003G408600 Sobic002G045600--Sobic009G027300 Sobic009G044800 Sobic009G044800 Sobic002G045600--Sobic009G044800 Sobic007G163100 Sobic007G163100 Sobic002G045600--Sobic007G163100 Sobic003G360400 Sobic003G360400 Sobic002G045600--Sobic003G360400 Sobic002G045600--Sobic001G313700 Sobic004G200200 Sobic004G200200 Sobic002G045600--Sobic004G200200 Sobic001G207000 Sobic001G207000 Sobic002G045600--Sobic001G207000 Sobic002G045600--Sobic003G422500 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic007G075400--Sobic004G065000 Sobic001G313700--Sobic003G360400 Sobic001G313700--Sobic002G045600 Sobic001G313700--Sobic009G044800 Sobic010G112100 Sobic010G112100 Sobic001G313700--Sobic010G112100 Sobic001G313700--Sobic003G408600 Sobic001G313700--Sobic001G273700 Sobic002G154000 Sobic002G154000 Sobic001G313700--Sobic002G154000 Sobic008G099800 Sobic008G099800 Sobic001G313700--Sobic008G099800 Sobic001G457900 Sobic001G457900 Sobic001G313700--Sobic001G457900 Sobic010G072800--Sobic001G375600 Sobic006G271200 Sobic006G271200 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic010G072800--Sobic006G204900 Sobic010G072800--Sobic004G269200 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic004G065000--Sobic007G075400 Sobic004G065000--Sobic004G331100 Sobic009G133500 Sobic009G133500 Sobic004G065000--Sobic009G133500 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic004G065000--Sobic001G313700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300 Sobic004G355000 Sobic004G355000 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G207400--Sobic001G050200
Octagon: transcription factors


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