Gene annotation
Transcriptome id Sobic.009G165400.1
Synonym ATPAH1, Sb09g022740, PAH1
Functional annotation lipin, N-terminal conserved region family protein, expressed
UniProt C5YZB4
Pfam PF16876 PF04571 PF08235
Panther DB PTHR12181 PTHR12181:SF12
NCBI CDD -
KEGG Orthology K15728; phosphatidate phosphatase LPIN
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09560 : Lipin family protein
RAP-DB (Rice) LOC_Os05g38710.1 : lipin, N-terminal conserved region family protein, expressed
MaizeGDB (Corn) Zm00025a043914
Brachypodium KQK05866 , KQK05867 , KQK05868 , KQK05865
Barley HORVU1Hr1G071890.8 , HORVU1Hr1G071890.4 , HORVU1Hr1G071890.5 , HORVU1Hr1G071890.6 , HORVU1Hr1G071890.1 , HORVU1Hr1G071890.2 , HORVU1Hr1G071890.18 , HORVU1Hr1G071890.19 , HORVU1Hr1G071890.16 , HORVU1Hr1G071890.17 , HORVU1Hr1G071890.14 , HORVU1Hr1G071890.15 , HORVU1Hr1G071890.12 , HORVU1Hr1G071890.13 , HORVU1Hr1G071890.10 , HORVU1Hr1G071890.7 , HORVU1Hr1G071890.3 , HORVU1Hr1G071890.20
Wheat TraesCS1B02G296800 , TraesCS1D02G286300 , TraesCS1D02G286300 , TraesCS1A02G287400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
2 Sobic.001G375600 transmembrane protein, putative, expressed -
3 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.008G099800 expressed protein -
5 Sobic.001G313700 expressed protein -
6 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
7 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
8 Sobic.008G167800 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
9 Sobic.001G007100 expressed protein -
10 Sobic.004G065000 expressed protein -
11 Sobic.006G115600 expressed protein -
12 Sobic.007G075400 expressed protein -
13 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
14 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
15 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
16 Sobic.004G329400 formin, putative, expressed -
17 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
18 Sobic.001G457900 expressed protein -
19 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
20 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1


Gene co-expression network
sample Sobic009G165400 Sobic009G165400 Sobic004G269200 Sobic004G269200 Sobic009G165400--Sobic004G269200 Sobic001G375600 Sobic001G375600 Sobic009G165400--Sobic001G375600 Sobic001G273700 Sobic001G273700 Sobic009G165400--Sobic001G273700 Sobic008G099800 Sobic008G099800 Sobic009G165400--Sobic008G099800 Sobic001G313700 Sobic001G313700 Sobic009G165400--Sobic001G313700 Sobic009G027300 Sobic009G027300 Sobic009G165400--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic009G165400--Sobic002G419800 Sobic008G167800 Sobic008G167800 Sobic009G165400--Sobic008G167800 Sobic001G007100 Sobic001G007100 Sobic009G165400--Sobic001G007100 Sobic004G269200--Sobic009G027300 Sobic001G050200 Sobic001G050200 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic005G157000 Sobic005G157000 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic001G375600--Sobic001G007100 Sobic010G072800 Sobic010G072800 Sobic001G375600--Sobic010G072800 Sobic001G375600--Sobic009G165400 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic003G089000 Sobic003G089000 Sobic001G375600--Sobic003G089000 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic006G204900 Sobic006G204900 Sobic001G375600--Sobic006G204900 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic008G099800--Sobic004G135400 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic004G113400 Sobic004G113400 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000 Sobic003G360400 Sobic003G360400 Sobic001G313700--Sobic003G360400 Sobic002G045600 Sobic002G045600 Sobic001G313700--Sobic002G045600 Sobic009G044800 Sobic009G044800 Sobic001G313700--Sobic009G044800 Sobic010G112100 Sobic010G112100 Sobic001G313700--Sobic010G112100 Sobic003G408600 Sobic003G408600 Sobic001G313700--Sobic003G408600 Sobic001G313700--Sobic001G273700 Sobic002G154000 Sobic002G154000 Sobic001G313700--Sobic002G154000 Sobic001G313700--Sobic008G099800 Sobic001G313700--Sobic001G457900 Sobic008G132600 Sobic008G132600 Sobic009G027300--Sobic008G132600 Sobic009G027300--Sobic002G045600 Sobic009G027300--Sobic004G331100 Sobic003G422500 Sobic003G422500 Sobic009G027300--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic009G027300--Sobic002G008900 Sobic009G027300--Sobic003G101400 Sobic009G027300--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic009G027300--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic009G027300--Sobic007G075400 Sobic002G419800--Sobic004G331100 Sobic002G419800--Sobic001G050200 Sobic002G419800--Sobic009G027300 Sobic002G419800--Sobic007G075400 Sobic001G290100 Sobic001G290100 Sobic002G419800--Sobic001G290100 Sobic007G172400 Sobic007G172400 Sobic002G419800--Sobic007G172400 Sobic001G289600 Sobic001G289600 Sobic002G419800--Sobic001G289600 Sobic007G024700 Sobic007G024700 Sobic002G419800--Sobic007G024700 Sobic007G105100 Sobic007G105100 Sobic002G419800--Sobic007G105100 Sobic009G094300 Sobic009G094300 Sobic008G167800--Sobic009G094300 Sobic008G167800--Sobic004G329400 Sobic003G014500 Sobic003G014500 Sobic008G167800--Sobic003G014500 Sobic008G167800--Sobic004G113400 Sobic010G112300 Sobic010G112300 Sobic008G167800--Sobic010G112300 Sobic008G167800--Sobic008G099800 Sobic008G167800--Sobic003G259100 Sobic001G050600 Sobic001G050600 Sobic008G167800--Sobic001G050600 Sobic008G167800--Sobic009G165400 Sobic001G007100--Sobic001G375600 Sobic001G007100--Sobic009G027300 Sobic001G007100--Sobic002G045600 Sobic001G007100--Sobic007G075400 Sobic001G007100--Sobic001G313700 Sobic001G007100--Sobic010G072800 Sobic010G139600 Sobic010G139600 Sobic001G007100--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic001G007100--Sobic004G065000 Sobic001G207400 Sobic001G207400 Sobic001G007100--Sobic001G207400
Octagon: transcription factors


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