Gene annotation
Transcriptome id Sobic.010G072800.1,Sobic.010G072800.2,Sobic.010G072800.3
Synonym Sb10g006370
Functional annotation exportin-7-A, putative, expressed
UniProt C5Z5Z7
Pfam PF03810
Panther DB PTHR12596 PTHR12596:SF2
NCBI CDD -
KEGG Orthology K18460; XPO7, exportin-7
Gene Ontology GO:0008536; Ran GTPase binding GO:0006886intracellular protein transport


Orthologs (automatic annotation)
TAIR AT5G06120 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os03g42050.1 : exportin-7-A, putative, expressed
MaizeGDB (Corn) Zm00025a042436
Brachypodium KQK17379 , PNT70348 , PNT70349 , PNT70346 , PNT70347 , PNT70345 , KQK17384 , KQK17382 , KQK17383 , KQK17380 , KQK17381 , PNT75525 , PNT75524 , PNT75526 , KQK03927 , KQK03926 , KQK03925 , KQK03924 , KQK03929 , KQK03928 , PNT70351 , PNT70350
Barley HORVU3Hr1G039600.9 , HORVU3Hr1G039600.8 , HORVU3Hr1G039600.3 , HORVU3Hr1G039600.2 , HORVU3Hr1G039600.1 , HORVU3Hr1G039600.7 , HORVU3Hr1G039600.6 , HORVU3Hr1G039600.4 , HORVU3Hr1G039600.19 , HORVU3Hr1G039600.18 , HORVU3Hr1G039600.13 , HORVU3Hr1G039600.12 , HORVU3Hr1G039600.11 , HORVU3Hr1G039600.10 , HORVU3Hr1G039600.17 , HORVU3Hr1G039600.16 , HORVU3Hr1G039600.15 , HORVU3Hr1G039600.38 , HORVU3Hr1G039600.36 , HORVU3Hr1G039600.39 , HORVU3Hr1G039600.5 , HORVU3Hr1G039600.35 , HORVU3Hr1G039600.34 , HORVU3Hr1G039600.37 , HORVU3Hr1G039600.31 , HORVU3Hr1G039600.30 , HORVU3Hr1G039600.33 , HORVU3Hr1G039600.32 , HORVU3Hr1G039600.22 , HORVU3Hr1G039600.23 , HORVU3Hr1G039600.20 , HORVU3Hr1G039600.21 , HORVU3Hr1G039600.26 , HORVU3Hr1G039600.27 , HORVU3Hr1G039600.24 , HORVU3Hr1G039600.25 , HORVU3Hr1G039600.28 , HORVU3Hr1G039600.29 , HORVU3Hr1G039600.44 , HORVU3Hr1G039600.45 , HORVU3Hr1G039600.46 , HORVU3Hr1G039600.40 , HORVU3Hr1G039600.42 , HORVU3Hr1G039600.43 , HORVU3Hr1G039600.14
Wheat TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3D02G193800 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3A02G190300 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3B02G219200 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3D02G193800 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300 , TraesCS3A02G190300
Populus -


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cDNA sequences
Sobic.010G072800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375600 transmembrane protein, putative, expressed -
2 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
3 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
4 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
5 Sobic.004G209800 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
6 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
7 Sobic.007G060201 - -
8 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
9 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
10 Sobic.001G007100 expressed protein -
11 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
12 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
13 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
14 Sobic.004G016000 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
15 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
16 Sobic.007G088100 phosphatidylinositol 3-kinase, root isoform, putative, expressed K00914: PIK3C3, phosphatidylinositol 3-kinase
17 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
18 Sobic.004G261600 expressed protein -
19 Sobic.003G246100 AMSH-like protease, putative, expressed K11866: STAMBP, STAM-binding protein
20 Sobic.004G351300 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic010G072800 Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic010G072800--Sobic001G375600 Sobic006G271200 Sobic006G271200 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic003G089000 Sobic003G089000 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic006G204900 Sobic006G204900 Sobic010G072800--Sobic006G204900 Sobic004G269200 Sobic004G269200 Sobic010G072800--Sobic004G269200 Sobic001G007100 Sobic001G007100 Sobic001G375600--Sobic001G007100 Sobic001G375600--Sobic010G072800 Sobic009G165400 Sobic009G165400 Sobic001G375600--Sobic009G165400 Sobic001G273700 Sobic001G273700 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic001G375600--Sobic003G089000 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic001G375600--Sobic006G204900 Sobic001G003000 Sobic001G003000 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic006G271200--Sobic010G072800 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic004G355000 Sobic004G355000 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic004G016000 Sobic004G016000 Sobic004G209800--Sobic004G016000 Sobic004G178300 Sobic004G178300 Sobic004G209800--Sobic004G178300 Sobic004G209800--Sobic010G072800 Sobic001G137000 Sobic001G137000 Sobic004G209800--Sobic001G137000 Sobic002G156000 Sobic002G156000 Sobic004G209800--Sobic002G156000 Sobic004G209800--Sobic001G007100 Sobic004G223300 Sobic004G223300 Sobic004G209800--Sobic004G223300 Sobic001G413900 Sobic001G413900 Sobic004G209800--Sobic001G413900 Sobic004G209800--Sobic001G375600 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic006G032300 Sobic006G032300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic003G089000--Sobic010G072800 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic003G089000--Sobic001G375600 Sobic007G000200 Sobic007G000200 Sobic003G089000--Sobic007G000200 Sobic001G281100 Sobic001G281100 Sobic007G060201--Sobic001G281100 Sobic004G277200 Sobic004G277200 Sobic007G060201--Sobic004G277200 Sobic007G060201--Sobic001G207400 Sobic007G060201--Sobic004G269200 Sobic008G087866 Sobic008G087866 Sobic007G060201--Sobic008G087866 Sobic010G118950 Sobic010G118950 Sobic007G060201--Sobic010G118950 Sobic007G060201--Sobic001G050200 Sobic004G135400 Sobic004G135400 Sobic007G060201--Sobic004G135400 Sobic002G045600 Sobic002G045600 Sobic007G060201--Sobic002G045600 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic006G204900--Sobic002G430000 Sobic009G027300 Sobic009G027300 Sobic004G269200--Sobic009G027300 Sobic004G269200--Sobic001G050200 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800
Octagon: transcription factors


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