Gene annotation
Transcriptome id Sobic.006G115600.4,Sobic.006G115600.3,Sobic.006G115600.1,Sobic.006G115600.2
Synonym Sb06g019700
Functional annotation expressed protein
UniProt C5YAB7
Pfam -
Panther DB PTHR35767 PTHR35767:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56250 : hapless 8
RAP-DB (Rice) LOC_Os04g39560.2,LOC_Os04g39560.1 : expressed protein
MaizeGDB (Corn) Zm00025a056277 , Zm00025a011040
Brachypodium KQJ83106 , KQJ83107 , PNT61274 , PNT61275
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G115600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075400 expressed protein -
2 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
3 Sobic.004G264400 TBC domain containing protein, expressed -
4 Sobic.001G050200 expressed protein -
5 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
6 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
7 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
8 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
9 Sobic.010G278200 expressed protein -
10 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
11 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
12 Sobic.003G246100 AMSH-like protease, putative, expressed K11866: STAMBP, STAM-binding protein
13 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
14 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
15 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
16 Sobic.003G316500 expressed protein -
17 Sobic.001G313700 expressed protein -
18 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
20 Sobic.001G107600 - K18328: lariat debranching enzyme


Gene co-expression network
sample Sobic006G115600 Sobic006G115600 Sobic007G075400 Sobic007G075400 Sobic006G115600--Sobic007G075400 Sobic002G045600 Sobic002G045600 Sobic006G115600--Sobic002G045600 Sobic004G264400 Sobic004G264400 Sobic006G115600--Sobic004G264400 Sobic001G050200 Sobic001G050200 Sobic006G115600--Sobic001G050200 Sobic010G139600 Sobic010G139600 Sobic006G115600--Sobic010G139600 Sobic004G331100 Sobic004G331100 Sobic006G115600--Sobic004G331100 Sobic007G163100 Sobic007G163100 Sobic006G115600--Sobic007G163100 Sobic003G118200 Sobic003G118200 Sobic006G115600--Sobic003G118200 Sobic010G278200 Sobic010G278200 Sobic006G115600--Sobic010G278200 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic002G008900 Sobic002G008900 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic003G422500 Sobic003G422500 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic003G408600 Sobic003G408600 Sobic002G045600--Sobic003G408600 Sobic009G027300 Sobic009G027300 Sobic002G045600--Sobic009G027300 Sobic009G044800 Sobic009G044800 Sobic002G045600--Sobic009G044800 Sobic002G045600--Sobic007G163100 Sobic003G360400 Sobic003G360400 Sobic002G045600--Sobic003G360400 Sobic001G313700 Sobic001G313700 Sobic002G045600--Sobic001G313700 Sobic004G200200 Sobic004G200200 Sobic002G045600--Sobic004G200200 Sobic001G207000 Sobic001G207000 Sobic002G045600--Sobic001G207000 Sobic002G045600--Sobic003G422500 Sobic001G109800 Sobic001G109800 Sobic004G264400--Sobic001G109800 Sobic009G113000 Sobic009G113000 Sobic004G264400--Sobic009G113000 Sobic002G132000 Sobic002G132000 Sobic004G264400--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G264400--Sobic007G024700 Sobic004G264400--Sobic004G331100 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G274200 Sobic004G274200 Sobic004G264400--Sobic004G274200 Sobic004G264400--Sobic007G075400 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic004G331100--Sobic007G075400 Sobic004G331100--Sobic009G027300 Sobic004G331100--Sobic002G419800 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic004G331100--Sobic001G050200 Sobic004G347400 Sobic004G347400 Sobic004G331100--Sobic004G347400 Sobic004G331100--Sobic003G118200 Sobic004G331100--Sobic004G065000 Sobic007G163100--Sobic003G408600 Sobic008G118200 Sobic008G118200 Sobic007G163100--Sobic008G118200 Sobic007G163100--Sobic002G045600 Sobic001G117200 Sobic001G117200 Sobic007G163100--Sobic001G117200 Sobic003G072200 Sobic003G072200 Sobic007G163100--Sobic003G072200 Sobic007G163100--Sobic003G422500 Sobic001G540400 Sobic001G540400 Sobic007G163100--Sobic001G540400 Sobic001G289800 Sobic001G289800 Sobic007G163100--Sobic001G289800 Sobic004G113400 Sobic004G113400 Sobic007G163100--Sobic004G113400 Sobic003G118200--Sobic009G053900 Sobic003G118200--Sobic009G191000 Sobic003G118200--Sobic009G113000 Sobic003G118200--Sobic003G422500 Sobic003G118200--Sobic002G008900 Sobic003G118200--Sobic004G347400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G118200--Sobic003G313500 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic009G138100 Sobic009G138100 Sobic010G278200--Sobic009G138100 Sobic010G130000 Sobic010G130000 Sobic010G278200--Sobic010G130000 Sobic001G124200 Sobic001G124200 Sobic010G278200--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic008G124900 Sobic008G124900 Sobic010G278200--Sobic008G124900
Octagon: transcription factors


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