Gene annotation
Transcriptome id Sobic.001G107600.1,Sobic.001G107600.2,Sobic.001G107600.3
Synonym ATDBR1, DBR1, Sb01g009610
Functional annotation -
UniProt A0A1B6QIB7 , A0A1B6QID1 , A0A1B6QIC4
Pfam PF00149 PF05011 PF05011
Panther DB PTHR12849
NCBI CDD KOG2863; RNA lariat debranching enzyme
KEGG Orthology K18328; lariat debranching enzyme
Gene Ontology GO:0016787; hydrolase activity GO:0016788hydrolase activity, acting on ester bonds GO:0006397mRNA processing GO:0016788hydrolase activity, acting on ester bonds GO:0006397mRNA processing


Orthologs (automatic annotation)
TAIR AT4G31770 : debranching enzyme 1
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a016902
Brachypodium KQK13449
Barley HORVU4Hr1G009360.8 , HORVU4Hr1G009360.9 , HORVU4Hr1G009360.4 , HORVU4Hr1G009360.5 , HORVU4Hr1G009360.6 , HORVU4Hr1G009360.7 , HORVU4Hr1G009360.1 , HORVU4Hr1G009360.2 , HORVU4Hr1G009360.3 , HORVU4Hr1G009360.12 , HORVU4Hr1G009360.10 , HORVU4Hr1G009360.11
Wheat TraesCS4A02G258100 , TraesCS4B02G056400 , TraesCS4B02G056400 , TraesCS4D02G056700
Populus -


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cDNA sequences
Sobic.001G107600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G050200 expressed protein -
2 Sobic.010G228400 zinc finger, C3HC4 type, domain containing protein, expressed -
3 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
4 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
5 Sobic.006G115600 expressed protein -
6 Sobic.004G264400 TBC domain containing protein, expressed -
7 Sobic.002G427050 - -
8 Sobic.003G372500 DUF803 domain containing, putative, expressed -
9 Sobic.010G227100 BTB/POZ domain containing protein, putative, expressed -
10 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
11 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
12 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
13 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.001G137100 homeodomain protein, putative, expressed -
15 Sobic.002G111000 peptidase, putative, expressed -
16 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
17 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -
18 Sobic.007G075400 expressed protein -
19 Sobic.003G352600 ZOS1-16 - C2H2 zinc finger protein, expressed -
20 Sobic.006G082400 expressed protein -


Gene co-expression network
sample Sobic001G107600 Sobic001G107600 Sobic001G050200 Sobic001G050200 Sobic001G107600--Sobic001G050200 Sobic010G228400 Sobic010G228400 Sobic001G107600--Sobic010G228400 Sobic001G390800 Sobic001G390800 Sobic001G107600--Sobic001G390800 Sobic003G365300 Sobic003G365300 Sobic001G107600--Sobic003G365300 Sobic006G115600 Sobic006G115600 Sobic001G107600--Sobic006G115600 Sobic004G264400 Sobic004G264400 Sobic001G107600--Sobic004G264400 Sobic002G427050 Sobic002G427050 Sobic001G107600--Sobic002G427050 Sobic003G372500 Sobic003G372500 Sobic001G107600--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic001G107600--Sobic010G227100 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic003G422500 Sobic003G422500 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic009G191000 Sobic009G191000 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400 Sobic010G228400--Sobic001G107600 Sobic001G137100 Sobic001G137100 Sobic010G228400--Sobic001G137100 Sobic010G228400--Sobic003G365300 Sobic010G228400--Sobic001G390800 Sobic002G130800 Sobic002G130800 Sobic010G228400--Sobic002G130800 Sobic001G268200 Sobic001G268200 Sobic010G228400--Sobic001G268200 Sobic001G007000 Sobic001G007000 Sobic010G228400--Sobic001G007000 Sobic010G147100 Sobic010G147100 Sobic010G228400--Sobic010G147100 Sobic008G089100 Sobic008G089100 Sobic010G228400--Sobic008G089100 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic001G390800--Sobic010G147100 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G390800--Sobic001G050200 Sobic003G365300--Sobic001G390800 Sobic006G002000 Sobic006G002000 Sobic003G365300--Sobic006G002000 Sobic006G082400 Sobic006G082400 Sobic003G365300--Sobic006G082400 Sobic004G275700 Sobic004G275700 Sobic003G365300--Sobic004G275700 Sobic002G111000 Sobic002G111000 Sobic003G365300--Sobic002G111000 Sobic001G203900 Sobic001G203900 Sobic003G365300--Sobic001G203900 Sobic009G068500 Sobic009G068500 Sobic003G365300--Sobic009G068500 Sobic003G006300 Sobic003G006300 Sobic003G365300--Sobic003G006300 Sobic003G365300--Sobic001G107600 Sobic006G115600--Sobic007G075400 Sobic002G045600 Sobic002G045600 Sobic006G115600--Sobic002G045600 Sobic006G115600--Sobic004G264400 Sobic006G115600--Sobic001G050200 Sobic006G115600--Sobic010G139600 Sobic006G115600--Sobic004G331100 Sobic007G163100 Sobic007G163100 Sobic006G115600--Sobic007G163100 Sobic003G118200 Sobic003G118200 Sobic006G115600--Sobic003G118200 Sobic010G278200 Sobic010G278200 Sobic006G115600--Sobic010G278200 Sobic001G109800 Sobic001G109800 Sobic004G264400--Sobic001G109800 Sobic009G113000 Sobic009G113000 Sobic004G264400--Sobic009G113000 Sobic002G132000 Sobic002G132000 Sobic004G264400--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G264400--Sobic007G024700 Sobic004G264400--Sobic004G331100 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G274200 Sobic004G274200 Sobic004G264400--Sobic004G274200 Sobic004G264400--Sobic007G075400 Sobic009G010600 Sobic009G010600 Sobic002G427050--Sobic009G010600 Sobic002G340100 Sobic002G340100 Sobic002G427050--Sobic002G340100 Sobic002G427050--Sobic001G050200 Sobic002G427050--Sobic001G390800 Sobic002G315200 Sobic002G315200 Sobic002G427050--Sobic002G315200 Sobic007G060201 Sobic007G060201 Sobic002G427050--Sobic007G060201 Sobic002G427050--Sobic001G107600 Sobic002G427050--Sobic001G137100 Sobic004G091100 Sobic004G091100 Sobic002G427050--Sobic004G091100 Sobic003G372500--Sobic007G075400 Sobic003G372500--Sobic010G147100 Sobic003G316500 Sobic003G316500 Sobic003G372500--Sobic003G316500 Sobic003G372500--Sobic001G050200 Sobic003G372500--Sobic009G191000 Sobic003G372500--Sobic010G227100 Sobic001G534700 Sobic001G534700 Sobic003G372500--Sobic001G534700 Sobic003G372500--Sobic003G313500 Sobic003G372500--Sobic001G390800 Sobic002G243800 Sobic002G243800 Sobic010G227100--Sobic002G243800 Sobic002G383600 Sobic002G383600 Sobic010G227100--Sobic002G383600 Sobic010G227100--Sobic003G372500 Sobic006G275100 Sobic006G275100 Sobic010G227100--Sobic006G275100 Sobic007G190000 Sobic007G190000 Sobic010G227100--Sobic007G190000 Sobic010G227100--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G227100--Sobic002G146300 Sobic009G074400 Sobic009G074400 Sobic010G227100--Sobic009G074400 Sobic009G053900 Sobic009G053900 Sobic010G227100--Sobic009G053900
Octagon: transcription factors


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