Gene annotation
Transcriptome id Sobic.001G137100.1
Synonym BLH6, Sb01g011960
Functional annotation homeodomain protein, putative, expressed
UniProt C5WPM9
Pfam PF05920 PF07526
Panther DB PTHR11850 PTHR11850:SF90
NCBI CDD KOG0773; Transcription factor MEIS1 and related HOX domain proteins
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G34610 : BEL1-like homeodomain 6
RAP-DB (Rice) LOC_Os03g47740.2 : homeodomain protein, putative, expressed
MaizeGDB (Corn) Zm00025a017117 , Zm00025a007469
Brachypodium PNT62275 , PNT74316 , PNT74315 , KQJ85630 , KQJ85631 , KQK13788 , KQK13789 , KQJ85629 , KQJ85628
Barley HORVU4Hr1G003800.3 , HORVU4Hr1G003800.2 , HORVU4Hr1G003800.1 , HORVU4Hr1G003800.7 , HORVU4Hr1G003800.6 , HORVU4Hr1G003800.5 , HORVU4Hr1G003800.4 , HORVU5Hr1G001090.3 , HORVU5Hr1G001090.2 , HORVU5Hr1G001090.1 , HORVU5Hr1G001090.7 , HORVU5Hr1G001090.5
Wheat TraesCS4B02G025500 , TraesCS4A02G289400 , TraesCS5B02G006400 , TraesCS4D02G022600 , TraesCS5D02G013300 , TraesCS5A02G007800
Populus -


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cDNA sequences
Sobic.001G137100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
2 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
3 Sobic.010G228400 zinc finger, C3HC4 type, domain containing protein, expressed -
4 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
5 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
6 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
7 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
8 Sobic.002G111000 peptidase, putative, expressed -
9 Sobic.002G427050 - -
10 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
11 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
12 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
13 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
14 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
15 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
17 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
18 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
19 Sobic.003G352600 ZOS1-16 - C2H2 zinc finger protein, expressed -
20 Sobic.006G082400 expressed protein -


Gene co-expression network
sample Sobic001G137100 Sobic001G137100 Sobic001G390800 Sobic001G390800 Sobic001G137100--Sobic001G390800 Sobic007G024700 Sobic007G024700 Sobic001G137100--Sobic007G024700 Sobic010G228400 Sobic010G228400 Sobic001G137100--Sobic010G228400 Sobic002G132000 Sobic002G132000 Sobic001G137100--Sobic002G132000 Sobic001G270400 Sobic001G270400 Sobic001G137100--Sobic001G270400 Sobic002G130800 Sobic002G130800 Sobic001G137100--Sobic002G130800 Sobic009G094300 Sobic009G094300 Sobic001G137100--Sobic009G094300 Sobic002G111000 Sobic002G111000 Sobic001G137100--Sobic002G111000 Sobic002G427050 Sobic002G427050 Sobic001G137100--Sobic002G427050 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic001G107600 Sobic001G107600 Sobic010G228400--Sobic001G107600 Sobic010G228400--Sobic001G137100 Sobic003G365300 Sobic003G365300 Sobic010G228400--Sobic003G365300 Sobic010G228400--Sobic001G390800 Sobic010G228400--Sobic002G130800 Sobic010G228400--Sobic001G268200 Sobic001G007000 Sobic001G007000 Sobic010G228400--Sobic001G007000 Sobic010G228400--Sobic010G147100 Sobic008G089100 Sobic008G089100 Sobic010G228400--Sobic008G089100 Sobic004G006200 Sobic004G006200 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic004G295800 Sobic004G295800 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic002G132000--Sobic003G305200 Sobic002G132000--Sobic001G137100 Sobic001G270400--Sobic007G024700 Sobic001G270400--Sobic009G094300 Sobic001G270400--Sobic010G205800 Sobic003G109100 Sobic003G109100 Sobic001G270400--Sobic003G109100 Sobic001G270400--Sobic001G137100 Sobic001G270400--Sobic002G270500 Sobic001G270400--Sobic001G121200 Sobic001G270400--Sobic004G052900 Sobic001G199100 Sobic001G199100 Sobic001G270400--Sobic001G199100 Sobic006G092400 Sobic006G092400 Sobic002G130800--Sobic006G092400 Sobic002G130800--Sobic001G137100 Sobic004G118200 Sobic004G118200 Sobic002G130800--Sobic004G118200 Sobic002G130800--Sobic010G147100 Sobic006G090500 Sobic006G090500 Sobic002G130800--Sobic006G090500 Sobic002G130800--Sobic010G228400 Sobic004G233200 Sobic004G233200 Sobic002G130800--Sobic004G233200 Sobic009G217100 Sobic009G217100 Sobic002G130800--Sobic009G217100 Sobic001G481900 Sobic001G481900 Sobic002G130800--Sobic001G481900 Sobic009G094300--Sobic007G024700 Sobic004G113400 Sobic004G113400 Sobic009G094300--Sobic004G113400 Sobic009G094300--Sobic002G270500 Sobic004G329400 Sobic004G329400 Sobic009G094300--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic009G094300--Sobic001G270400 Sobic001G248300 Sobic001G248300 Sobic009G094300--Sobic001G248300 Sobic001G207400 Sobic001G207400 Sobic009G094300--Sobic001G207400 Sobic002G111000--Sobic001G207400 Sobic002G111000--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic002G111000--Sobic001G016700 Sobic002G111000--Sobic001G121200 Sobic002G111000--Sobic003G365300 Sobic002G430000 Sobic002G430000 Sobic002G111000--Sobic002G430000 Sobic002G111000--Sobic010G139600 Sobic002G111000--Sobic010G147100 Sobic002G111000--Sobic001G137100 Sobic009G010600 Sobic009G010600 Sobic002G427050--Sobic009G010600 Sobic002G340100 Sobic002G340100 Sobic002G427050--Sobic002G340100 Sobic002G427050--Sobic001G050200 Sobic002G427050--Sobic001G390800 Sobic002G315200 Sobic002G315200 Sobic002G427050--Sobic002G315200 Sobic007G060201 Sobic007G060201 Sobic002G427050--Sobic007G060201 Sobic002G427050--Sobic001G107600 Sobic002G427050--Sobic001G137100 Sobic004G091100 Sobic004G091100 Sobic002G427050--Sobic004G091100
Octagon: transcription factors


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