Gene annotation
Transcriptome id Sobic.004G006200.1,Sobic.004G006200.5,Sobic.004G006200.3,Sobic.004G006200.4,Sobic.004G006200.2
Synonym Sb04g000740, FC1, ATFC-I, FC-I
Functional annotation ferrochelatase-2, chloroplast precursor, putative, expressed
UniProt A0A1Z5RLC5 , C5XRL6 , A0A1Z5RKI0 , A0A1Z5RKB9
Pfam PF00762
Panther DB PTHR11108 PTHR11108:SF4
NCBI CDD KOG1321; Protoheme ferro-lyase (ferrochelatase)
KEGG Orthology K01772; hemH, protoporphyrin/coproporphyrin ferrochelatase
Gene Ontology GO:0006783; heme biosynthetic process GO:0004325ferrochelatase activity


Orthologs (automatic annotation)
TAIR AT5G26030 : ferrochelatase 1
RAP-DB (Rice) LOC_Os09g12560.2,LOC_Os09g12560.1 : ferrochelatase-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018655 , Zm00025a013678
Brachypodium KQJ89751 , KQJ89752 , KQK02111
Barley HORVU5Hr1G054060.4 , HORVU5Hr1G054060.5 , HORVU5Hr1G054060.6 , HORVU5Hr1G054060.7 , HORVU5Hr1G054060.1 , HORVU5Hr1G054060.2 , HORVU5Hr1G054060.3
Wheat TraesCS5A02G177800 , TraesCS5B02G175100 , TraesCS5D02G182100
Populus -


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cDNA sequences
Sobic.004G006200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
2 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
3 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
5 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
6 Sobic.004G264400 TBC domain containing protein, expressed -
7 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
9 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
10 Sobic.001G137100 homeodomain protein, putative, expressed -
11 Sobic.003G063000 expressed protein -
12 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
13 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
14 Sobic.002G427050 - -
15 Sobic.009G228700 expressed protein -
16 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
17 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
18 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
19 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
20 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G006200 Sobic004G006200 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic001G373200 Sobic001G373200 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic004G295800--Sobic001G290000 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic007G062600--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic007G062600--Sobic003G433100 Sobic009G207000 Sobic009G207000 Sobic007G062600--Sobic009G207000 Sobic003G063000 Sobic003G063000 Sobic007G062600--Sobic003G063000 Sobic009G228700 Sobic009G228700 Sobic007G062600--Sobic009G228700 Sobic006G249700 Sobic006G249700 Sobic007G062600--Sobic006G249700 Sobic009G154800 Sobic009G154800 Sobic007G062600--Sobic009G154800 Sobic009G259400 Sobic009G259400 Sobic007G062600--Sobic009G259400 Sobic004G104900 Sobic004G104900 Sobic007G062600--Sobic004G104900 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic007G172400 Sobic007G172400 Sobic004G052900--Sobic007G172400 Sobic002G340100 Sobic002G340100 Sobic004G052900--Sobic002G340100 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic004G052900--Sobic009G094300 Sobic004G264400--Sobic001G109800 Sobic004G264400--Sobic009G113000 Sobic004G264400--Sobic002G132000 Sobic004G264400--Sobic007G024700 Sobic004G331100 Sobic004G331100 Sobic004G264400--Sobic004G331100 Sobic006G115600 Sobic006G115600 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G274200 Sobic004G274200 Sobic004G264400--Sobic004G274200 Sobic007G075400 Sobic007G075400 Sobic004G264400--Sobic007G075400 Sobic002G424000--Sobic004G006200 Sobic002G424000--Sobic003G433100 Sobic002G424000--Sobic007G024700 Sobic002G424000--Sobic009G207000 Sobic003G352600 Sobic003G352600 Sobic002G424000--Sobic003G352600 Sobic002G424000--Sobic001G137100 Sobic002G130800 Sobic002G130800 Sobic002G424000--Sobic002G130800 Sobic002G424000--Sobic002G132000 Sobic001G390800 Sobic001G390800 Sobic002G424000--Sobic001G390800 Sobic001G199100--Sobic003G012200 Sobic004G275700 Sobic004G275700 Sobic001G199100--Sobic004G275700 Sobic009G075800 Sobic009G075800 Sobic001G199100--Sobic009G075800 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic001G199100--Sobic004G348300 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400
Octagon: transcription factors


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