Gene annotation
Transcriptome id Sobic.003G063000.1
Synonym Sb03g005380, IMPA-9
Functional annotation expressed protein
UniProt C5XP88
Pfam PF00514
Panther DB PTHR23316 PTHR23316:SF1
NCBI CDD KOG0166; Karyopherin (importin) alpha
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03070 : importin alpha isoform 9
RAP-DB (Rice) LOC_Os01g06470.1 : expressed protein
MaizeGDB (Corn) Zm00025a035656
Brachypodium KQK02244
Barley HORVU3Hr1G025640.8 , HORVU3Hr1G025640.9 , HORVU3Hr1G025640.2 , HORVU3Hr1G025640.3 , HORVU3Hr1G025640.1 , HORVU3Hr1G025640.6 , HORVU3Hr1G025640.7 , HORVU3Hr1G025640.4 , HORVU3Hr1G025640.5 , HORVU3Hr1G025640.10 , HORVU3Hr1G025640.11 , HORVU3Hr1G025640.12
Wheat TraesCS3A02G309900 , TraesCS3A02G309900 , TraesCS3D02G135500 , TraesCS3D02G135500 , TraesCS3B02G152900
Populus -


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cDNA sequences
Sobic.003G063000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
2 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
3 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
4 Sobic.001G000200 TBC domain containing protein, expressed -
5 Sobic.002G352600 expressed protein -
6 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
7 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
8 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
10 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
11 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
12 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
13 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
14 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
15 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
16 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
17 Sobic.004G121100 expressed protein -
18 Sobic.001G181700 expressed protein -
19 Sobic.004G183600 molybdenum cofactor biosynthesis protein 1, putative, expressed K03639: moaA, GTP 3',8-cyclase
20 Sobic.003G344900 selT-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic003G063000 Sobic003G063000 Sobic009G259400 Sobic009G259400 Sobic003G063000--Sobic009G259400 Sobic004G006200 Sobic004G006200 Sobic003G063000--Sobic004G006200 Sobic004G348300 Sobic004G348300 Sobic003G063000--Sobic004G348300 Sobic001G000200 Sobic001G000200 Sobic003G063000--Sobic001G000200 Sobic002G352600 Sobic002G352600 Sobic003G063000--Sobic002G352600 Sobic009G217100 Sobic009G217100 Sobic003G063000--Sobic009G217100 Sobic007G062600 Sobic007G062600 Sobic003G063000--Sobic007G062600 Sobic001G121200 Sobic001G121200 Sobic003G063000--Sobic001G121200 Sobic004G066200 Sobic004G066200 Sobic003G063000--Sobic004G066200 Sobic004G121100 Sobic004G121100 Sobic009G259400--Sobic004G121100 Sobic002G395801 Sobic002G395801 Sobic009G259400--Sobic002G395801 Sobic003G012200 Sobic003G012200 Sobic009G259400--Sobic003G012200 Sobic009G259400--Sobic009G217100 Sobic009G259400--Sobic003G063000 Sobic010G251000 Sobic010G251000 Sobic009G259400--Sobic010G251000 Sobic006G200600 Sobic006G200600 Sobic009G259400--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic009G259400--Sobic001G281600 Sobic008G179700 Sobic008G179700 Sobic009G259400--Sobic008G179700 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic004G006200--Sobic007G024700 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic004G006200--Sobic003G012200 Sobic004G348300--Sobic003G012200 Sobic003G344900 Sobic003G344900 Sobic004G348300--Sobic003G344900 Sobic004G348300--Sobic001G199100 Sobic004G348300--Sobic002G352600 Sobic006G249700 Sobic006G249700 Sobic004G348300--Sobic006G249700 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic003G015900 Sobic003G015900 Sobic002G352600--Sobic003G015900 Sobic010G027600 Sobic010G027600 Sobic002G352600--Sobic010G027600 Sobic009G228700 Sobic009G228700 Sobic002G352600--Sobic009G228700 Sobic002G352600--Sobic004G121100 Sobic002G352600--Sobic009G217100 Sobic002G352600--Sobic001G121200 Sobic010G000900 Sobic010G000900 Sobic002G352600--Sobic010G000900 Sobic002G352600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic002G352600--Sobic003G248200 Sobic009G217100--Sobic009G259400 Sobic009G217100--Sobic010G000900 Sobic007G007000 Sobic007G007000 Sobic009G217100--Sobic007G007000 Sobic009G217100--Sobic002G352600 Sobic002G226900 Sobic002G226900 Sobic009G217100--Sobic002G226900 Sobic009G217100--Sobic004G006200 Sobic009G217100--Sobic004G348300 Sobic001G137100 Sobic001G137100 Sobic009G217100--Sobic001G137100 Sobic009G217100--Sobic010G251000 Sobic007G062600--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic007G062600--Sobic003G433100 Sobic009G207000 Sobic009G207000 Sobic007G062600--Sobic009G207000 Sobic007G062600--Sobic003G063000 Sobic007G062600--Sobic009G228700 Sobic007G062600--Sobic006G249700 Sobic009G154800 Sobic009G154800 Sobic007G062600--Sobic009G154800 Sobic007G062600--Sobic009G259400 Sobic004G104900 Sobic004G104900 Sobic007G062600--Sobic004G104900 Sobic001G390800 Sobic001G390800 Sobic001G121200--Sobic001G390800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic002G111000 Sobic002G111000 Sobic001G121200--Sobic002G111000 Sobic010G147100 Sobic010G147100 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic001G356600 Sobic001G356600 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300
Octagon: transcription factors


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