Gene annotation
Transcriptome id Sobic.002G424000.2,Sobic.002G424000.4,Sobic.002G424000.1,Sobic.002G424000.3
Synonym Sb02g043480, TGA2, AHBP-1B
Functional annotation transcription factor, putative, expressed
UniProt A0A1B6QGF4
Pfam PF00170 PF14144
Panther DB PTHR22952 PTHR22952:SF189
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT3G12250 : TGACG motif-binding factor 6
RAP-DB (Rice) LOC_Os07g48820.2,LOC_Os07g48820.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a049215 , Zm00025a035188 , Zm00025a052520 , Zm00025a002218
Brachypodium KQK14553 , KQK14554
Barley HORVU2Hr1G016580.2 , HORVU2Hr1G016580.3 , HORVU2Hr1G016580.1 , HORVU2Hr1G016580.6 , HORVU2Hr1G016580.4 , HORVU2Hr1G016580.5 , HORVU3Hr1G042790.19 , HORVU3Hr1G042790.18 , HORVU3Hr1G042790.13 , HORVU3Hr1G042790.12 , HORVU3Hr1G042790.11 , HORVU3Hr1G042790.10 , HORVU3Hr1G042790.17 , HORVU3Hr1G042790.16 , HORVU3Hr1G042790.15 , HORVU3Hr1G042790.14 , HORVU3Hr1G042790.21 , HORVU3Hr1G042790.9 , HORVU3Hr1G042790.8 , HORVU3Hr1G042790.3 , HORVU3Hr1G042790.2 , HORVU3Hr1G042790.1 , HORVU3Hr1G042790.7 , HORVU3Hr1G042790.6 , HORVU3Hr1G042790.5 , HORVU3Hr1G042790.4 , HORVU3Hr1G042830.2 , HORVU3Hr1G042830.1 , HORVU3Hr1G042790.22 , HORVU3Hr1G042790.20
Wheat TraesCS2D02G096800 , TraesCS2D02G096800 , TraesCS2D02G096800 , TraesCS2A02G097500 , TraesCS2A02G097500 , TraesCS2A02G097500 , TraesCS2B02G113200 , TraesCS2B02G113200 , TraesCS2B02G113200
Populus PNT52395 , PNT52394 , PNT52397 , PNT52396 , PNT52399 , PNT52398 , PNT46481 , PNT46482 , PNT46483 , PNT46484 , PNT46485 , PNT46486 , PNT46487 , PNT46488 , PNT52401 , PNT52400 , PNT52403 , PNT52402


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
2 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
3 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
5 Sobic.003G352600 ZOS1-16 - C2H2 zinc finger protein, expressed -
6 Sobic.001G137100 homeodomain protein, putative, expressed -
7 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
9 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
10 Sobic.002G427050 - -
11 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
12 Sobic.008G110600 expressed protein -
13 Sobic.004G264400 TBC domain containing protein, expressed -
14 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
15 Sobic.009G228700 expressed protein -
16 Sobic.001G107600 - K18328: lariat debranching enzyme
17 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
18 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
19 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic002G424000 Sobic002G424000 Sobic004G006200 Sobic004G006200 Sobic002G424000--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic002G424000--Sobic003G433100 Sobic007G024700 Sobic007G024700 Sobic002G424000--Sobic007G024700 Sobic009G207000 Sobic009G207000 Sobic002G424000--Sobic009G207000 Sobic003G352600 Sobic003G352600 Sobic002G424000--Sobic003G352600 Sobic001G137100 Sobic001G137100 Sobic002G424000--Sobic001G137100 Sobic002G130800 Sobic002G130800 Sobic002G424000--Sobic002G130800 Sobic002G132000 Sobic002G132000 Sobic002G424000--Sobic002G132000 Sobic001G390800 Sobic001G390800 Sobic002G424000--Sobic001G390800 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic003G433100--Sobic007G062600 Sobic003G433100--Sobic004G295800 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic003G433100--Sobic002G424000 Sobic004G021100 Sobic004G021100 Sobic003G433100--Sobic004G021100 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic009G207000--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G207000--Sobic004G066200 Sobic009G207000--Sobic001G199100 Sobic001G323000 Sobic001G323000 Sobic009G207000--Sobic001G323000 Sobic001G085100 Sobic001G085100 Sobic009G207000--Sobic001G085100 Sobic006G249700 Sobic006G249700 Sobic009G207000--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G207000--Sobic006G148200 Sobic010G000900 Sobic010G000900 Sobic009G207000--Sobic010G000900 Sobic009G207000--Sobic003G012200 Sobic003G352600--Sobic001G390800 Sobic003G352600--Sobic001G137100 Sobic003G352600--Sobic002G424000 Sobic009G126900 Sobic009G126900 Sobic003G352600--Sobic009G126900 Sobic001G107600 Sobic001G107600 Sobic003G352600--Sobic001G107600 Sobic001G440600 Sobic001G440600 Sobic003G352600--Sobic001G440600 Sobic009G138100 Sobic009G138100 Sobic003G352600--Sobic009G138100 Sobic004G233200 Sobic004G233200 Sobic003G352600--Sobic004G233200 Sobic003G352600--Sobic002G270500 Sobic001G137100--Sobic001G390800 Sobic001G137100--Sobic007G024700 Sobic010G228400 Sobic010G228400 Sobic001G137100--Sobic010G228400 Sobic001G137100--Sobic002G132000 Sobic001G137100--Sobic001G270400 Sobic001G137100--Sobic002G130800 Sobic001G137100--Sobic009G094300 Sobic002G111000 Sobic002G111000 Sobic001G137100--Sobic002G111000 Sobic002G427050 Sobic002G427050 Sobic001G137100--Sobic002G427050 Sobic006G092400 Sobic006G092400 Sobic002G130800--Sobic006G092400 Sobic002G130800--Sobic001G137100 Sobic004G118200 Sobic004G118200 Sobic002G130800--Sobic004G118200 Sobic010G147100 Sobic010G147100 Sobic002G130800--Sobic010G147100 Sobic006G090500 Sobic006G090500 Sobic002G130800--Sobic006G090500 Sobic002G130800--Sobic010G228400 Sobic002G130800--Sobic004G233200 Sobic009G217100 Sobic009G217100 Sobic002G130800--Sobic009G217100 Sobic001G481900 Sobic001G481900 Sobic002G130800--Sobic001G481900 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic002G132000--Sobic003G305200 Sobic002G132000--Sobic001G137100 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200
Octagon: transcription factors


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