Gene annotation
Transcriptome id Sobic.003G101850.3,Sobic.003G101850.1,Sobic.003G101850.2
Synonym -
Functional annotation -
UniProt A0A1W0VWJ4 , A0A1W0VWI5 , A0A1W0VWI6
Pfam PF01966
Panther DB PTHR11373 PTHR11373:SF31
NCBI CDD KOG2681; Metal-dependent phosphohydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40270 : HD domain-containing metal-dependent phosphohydrolase family protein
RAP-DB (Rice) LOC_Os01g01920.2 : HD domain containing protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a035416 , Zm00025a023784
Brachypodium KQK02333 , KQK02335 , KQK02334 , PNT69815
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
2 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
3 Sobic.004G351300 protein binding protein, putative, expressed -
4 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
5 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
6 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
7 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
8 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
9 Sobic.009G193700 transmembrane protein 56, putative, expressed -
10 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
11 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
12 Sobic.009G133500 expressed protein -
13 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
14 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
15 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.005G157000 expressed protein -
17 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
19 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
20 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G101850 Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic003G101850--Sobic006G271200 Sobic006G204900 Sobic006G204900 Sobic003G101850--Sobic006G204900 Sobic004G351300 Sobic004G351300 Sobic003G101850--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic003G101850--Sobic001G436900 Sobic001G217400 Sobic001G217400 Sobic003G101850--Sobic001G217400 Sobic010G072800 Sobic010G072800 Sobic003G101850--Sobic010G072800 Sobic009G211400 Sobic009G211400 Sobic003G101850--Sobic009G211400 Sobic010G107000 Sobic010G107000 Sobic003G101850--Sobic010G107000 Sobic009G193700 Sobic009G193700 Sobic003G101850--Sobic009G193700 Sobic001G003000 Sobic001G003000 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic006G271200--Sobic004G351300 Sobic006G271200--Sobic001G436900 Sobic006G271200--Sobic010G072800 Sobic003G322700 Sobic003G322700 Sobic006G204900--Sobic003G322700 Sobic001G207400 Sobic001G207400 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic005G059600 Sobic005G059600 Sobic004G351300--Sobic005G059600 Sobic004G016000 Sobic004G016000 Sobic004G351300--Sobic004G016000 Sobic004G351300--Sobic006G237900 Sobic004G351300--Sobic006G271200 Sobic004G351300--Sobic003G101850 Sobic004G351300--Sobic010G072800 Sobic006G126500 Sobic006G126500 Sobic004G351300--Sobic006G126500 Sobic004G351300--Sobic001G003000 Sobic003G089000 Sobic003G089000 Sobic004G351300--Sobic003G089000 Sobic004G331100 Sobic004G331100 Sobic001G436900--Sobic004G331100 Sobic001G436900--Sobic003G320700 Sobic004G065000 Sobic004G065000 Sobic001G436900--Sobic004G065000 Sobic001G436900--Sobic006G271200 Sobic001G436900--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic001G436900--Sobic007G075400 Sobic009G113000 Sobic009G113000 Sobic001G436900--Sobic009G113000 Sobic002G382600 Sobic002G382600 Sobic001G436900--Sobic002G382600 Sobic010G264200 Sobic010G264200 Sobic001G436900--Sobic010G264200 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic001G217400--Sobic003G320700 Sobic007G210500 Sobic007G210500 Sobic001G217400--Sobic007G210500 Sobic001G217400--Sobic003G101850 Sobic001G217400--Sobic006G271200 Sobic001G375600 Sobic001G375600 Sobic010G072800--Sobic001G375600 Sobic010G072800--Sobic006G271200 Sobic010G072800--Sobic002G430000 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic010G072800--Sobic006G204900 Sobic010G072800--Sobic004G269200 Sobic003G219600 Sobic003G219600 Sobic009G211400--Sobic003G219600 Sobic009G211400--Sobic010G107000 Sobic009G029600 Sobic009G029600 Sobic009G211400--Sobic009G029600 Sobic003G138200 Sobic003G138200 Sobic009G211400--Sobic003G138200 Sobic004G260000 Sobic004G260000 Sobic009G211400--Sobic004G260000 Sobic002G215800 Sobic002G215800 Sobic009G211400--Sobic002G215800 Sobic009G054500 Sobic009G054500 Sobic009G211400--Sobic009G054500 Sobic009G211400--Sobic009G193700 Sobic005G018500 Sobic005G018500 Sobic009G211400--Sobic005G018500 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic003G355600 Sobic003G355600 Sobic010G107000--Sobic003G355600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic010G107000--Sobic009G029600 Sobic009G226300 Sobic009G226300 Sobic010G107000--Sobic009G226300 Sobic010G107000--Sobic003G138200 Sobic009G193700--Sobic010G107000 Sobic008G062200 Sobic008G062200 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic009G193700--Sobic001G089800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.