Gene annotation
Transcriptome id Sobic.001G217400.1
Synonym Sb01g019140
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF1336 domain containing protein, expressed
UniProt C5WYD3
Pfam PF00169 PF01852 PF07059
Panther DB PTHR12136 PTHR12136:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT2G28320 : Pleckstrin homology (PH) and lipid-binding START domains-containing protein
RAP-DB (Rice) LOC_Os10g33930.1 : DUF1336 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006582
Brachypodium PNT67560 , KQJ97128 , KQJ97125 , KQJ97127 , KQJ97126 , PNT67559 , PNT67558 , PNT67557
Barley HORVU1Hr1G041740.9 , HORVU1Hr1G041740.8 , HORVU1Hr1G041740.3 , HORVU1Hr1G041740.2 , HORVU1Hr1G041740.1 , HORVU1Hr1G041740.7 , HORVU1Hr1G041740.6 , HORVU1Hr1G041740.5 , HORVU1Hr1G041740.4 , HORVU1Hr1G041740.19 , HORVU1Hr1G041740.18 , HORVU1Hr1G041740.13 , HORVU1Hr1G041740.12 , HORVU1Hr1G041740.11 , HORVU1Hr1G041740.10 , HORVU1Hr1G041740.17 , HORVU1Hr1G041740.16 , HORVU1Hr1G041740.15 , HORVU1Hr1G041740.14 , HORVU1Hr1G041740.40 , HORVU1Hr1G041740.39 , HORVU1Hr1G041740.38 , HORVU1Hr1G041740.35 , HORVU1Hr1G041740.34 , HORVU1Hr1G041740.37 , HORVU1Hr1G041740.36 , HORVU1Hr1G041740.31 , HORVU1Hr1G041740.30 , HORVU1Hr1G041740.33 , HORVU1Hr1G041740.32 , HORVU1Hr1G041740.22 , HORVU1Hr1G041740.23 , HORVU1Hr1G041740.20 , HORVU1Hr1G041740.21 , HORVU1Hr1G041740.26 , HORVU1Hr1G041740.27 , HORVU1Hr1G041740.24 , HORVU1Hr1G041740.25 , HORVU1Hr1G041740.28 , HORVU1Hr1G041740.29 , HORVU1Hr1G041740.41 , HORVU1Hr1G041740.42
Wheat TraesCS1B02G173600 , TraesCS1D02G155000 , TraesCS1A02G156500 , TraesCS1A02G156500
Populus PNT18108


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cDNA sequences
Sobic.001G217400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G072400 SAC domain containing protein, putative, expressed -
2 Sobic.001G350900 OsFBO14 - F-box and other domain containing protein, expressed -
3 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
4 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
5 Sobic.003G269800 phosphatidylinositol transfer, putative, expressed -
6 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
8 Sobic.003G101850 - -
9 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
10 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
12 Sobic.004G351300 protein binding protein, putative, expressed -
13 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
14 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
15 Sobic.010G169000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Multi-drugresistance-associated protein 6(PubMedID : 26320239)@ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
17 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
18 Sobic.004G211866 - -
19 Sobic.001G440600 expressed protein -
20 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase


Gene co-expression network
sample Sobic001G217400 Sobic001G217400 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic003G320700 Sobic003G320700 Sobic001G217400--Sobic003G320700 Sobic007G210500 Sobic007G210500 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic001G217400--Sobic006G271200 Sobic007G172200 Sobic007G172200 Sobic010G072400--Sobic007G172200 Sobic010G072400--Sobic001G217400 Sobic001G043100 Sobic001G043100 Sobic010G072400--Sobic001G043100 Sobic007G133700 Sobic007G133700 Sobic010G072400--Sobic007G133700 Sobic001G370900 Sobic001G370900 Sobic010G072400--Sobic001G370900 Sobic002G042600 Sobic002G042600 Sobic010G072400--Sobic002G042600 Sobic006G126500 Sobic006G126500 Sobic010G072400--Sobic006G126500 Sobic006G077300 Sobic006G077300 Sobic010G072400--Sobic006G077300 Sobic003G198800 Sobic003G198800 Sobic010G072400--Sobic003G198800 Sobic001G350900--Sobic004G211900 Sobic001G350900--Sobic001G217400 Sobic004G211866 Sobic004G211866 Sobic001G350900--Sobic004G211866 Sobic006G033200 Sobic006G033200 Sobic001G350900--Sobic006G033200 Sobic008G047400 Sobic008G047400 Sobic001G350900--Sobic008G047400 Sobic002G217400 Sobic002G217400 Sobic001G350900--Sobic002G217400 Sobic001G103200 Sobic001G103200 Sobic001G350900--Sobic001G103200 Sobic001G541100 Sobic001G541100 Sobic001G350900--Sobic001G541100 Sobic001G414500 Sobic001G414500 Sobic001G350900--Sobic001G414500 Sobic001G003000 Sobic001G003000 Sobic001G350700--Sobic001G003000 Sobic001G350700--Sobic001G217400 Sobic006G090500 Sobic006G090500 Sobic001G350700--Sobic006G090500 Sobic001G350700--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic001G350700--Sobic006G214200 Sobic001G305500 Sobic001G305500 Sobic001G350700--Sobic001G305500 Sobic001G440600 Sobic001G440600 Sobic001G350700--Sobic001G440600 Sobic003G228100 Sobic003G228100 Sobic001G350700--Sobic003G228100 Sobic004G341200 Sobic004G341200 Sobic001G350700--Sobic004G341200 Sobic004G211900--Sobic004G211866 Sobic004G211900--Sobic001G350900 Sobic001G409300 Sobic001G409300 Sobic004G211900--Sobic001G409300 Sobic004G211900--Sobic001G217400 Sobic001G062300 Sobic001G062300 Sobic004G211900--Sobic001G062300 Sobic004G211900--Sobic007G210500 Sobic004G211900--Sobic003G269800 Sobic008G059100 Sobic008G059100 Sobic004G211900--Sobic008G059100 Sobic006G275100 Sobic006G275100 Sobic004G211900--Sobic006G275100 Sobic009G118600 Sobic009G118600 Sobic003G269800--Sobic009G118600 Sobic003G269800--Sobic001G217400 Sobic004G124500 Sobic004G124500 Sobic003G269800--Sobic004G124500 Sobic003G269800--Sobic001G409300 Sobic007G056600 Sobic007G056600 Sobic003G269800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic003G269800--Sobic003G126300 Sobic001G399800 Sobic001G399800 Sobic003G269800--Sobic001G399800 Sobic003G269800--Sobic004G211900 Sobic003G281900 Sobic003G281900 Sobic003G269800--Sobic003G281900 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic006G204900 Sobic006G204900 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G322700 Sobic003G322700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic001G282600 Sobic001G282600 Sobic007G210500--Sobic001G282600 Sobic002G262300 Sobic002G262300 Sobic007G210500--Sobic002G262300 Sobic009G080400 Sobic009G080400 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic007G210500--Sobic006G104600 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200 Sobic003G101850--Sobic006G271200 Sobic003G101850--Sobic006G204900 Sobic004G351300 Sobic004G351300 Sobic003G101850--Sobic004G351300 Sobic003G101850--Sobic001G436900 Sobic003G101850--Sobic001G217400 Sobic010G072800 Sobic010G072800 Sobic003G101850--Sobic010G072800 Sobic009G211400 Sobic009G211400 Sobic003G101850--Sobic009G211400 Sobic010G107000 Sobic010G107000 Sobic003G101850--Sobic010G107000 Sobic003G101850--Sobic009G193700 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic006G271200--Sobic004G351300 Sobic006G271200--Sobic001G436900 Sobic006G271200--Sobic010G072800
Octagon: transcription factors


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