Gene annotation
Transcriptome id Sobic.001G350700.1
Synonym SnRK2, SNRK2-8, SNRK2.8, Sb01g033570, SRK2C, SNF1-related protein kinase 2
Functional annotation Positive regulator of ABA (PubMedID : 30367619)
CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5WXQ1
Pfam PF00069
Panther DB PTHR24343 PTHR24343:SF168
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G78290 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g27280.1 : CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a043855 , Zm00025a048790 , Zm00025a052118
Brachypodium KQK15219 , KQK21434 , KQK21433 , KQK15218 , KQK15220
Barley HORVU2Hr1G110230.10 , HORVU2Hr1G110230.13 , HORVU2Hr1G110230.12 , HORVU2Hr1G110230.15 , HORVU2Hr1G110230.14 , HORVU2Hr1G110230.17 , HORVU2Hr1G110230.16 , HORVU2Hr1G110230.19 , HORVU3Hr1G082690.5 , HORVU2Hr1G125950.4 , HORVU2Hr1G125950.5 , HORVU2Hr1G125950.1 , HORVU2Hr1G125950.2 , HORVU2Hr1G125950.3 , HORVU3Hr1G082690.6 , HORVU3Hr1G082690.7 , HORVU3Hr1G082690.4 , HORVU3Hr1G082690.2 , HORVU3Hr1G082690.3 , HORVU3Hr1G082690.1 , HORVU3Hr1G082690.8 , HORVU3Hr1G082690.9 , HORVU2Hr1G110230.5 , HORVU2Hr1G110230.4 , HORVU2Hr1G110230.7 , HORVU2Hr1G110230.6 , HORVU2Hr1G110230.3 , HORVU2Hr1G110230.2 , HORVU2Hr1G110230.9 , HORVU2Hr1G110230.8 , HORVU2Hr1G110230.24 , HORVU2Hr1G110230.25 , HORVU2Hr1G110230.20 , HORVU2Hr1G110230.21 , HORVU2Hr1G110230.22 , HORVU2Hr1G110230.23 , HORVU3Hr1G082690.14 , HORVU3Hr1G082690.10 , HORVU3Hr1G082690.11 , HORVU3Hr1G082690.12 , HORVU3Hr1G082690.13
Wheat TraesCS2B02G189600 , TraesCS2B02G189600 , TraesCS3A02G381100 , TraesCS3D02G374300 , TraesCS2D02G577000 , TraesCS2D02G493700 , TraesCS3B02G413800 , TraesCS2A02G566700 , TraesCS2B02G521800 , TraesCS2B02G189600 , TraesCS2A02G493800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2D02G170700 , TraesCS2D02G170700 , TraesCS2B02G630000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
2 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
3 Sobic.006G090500 chloride channel C(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K05016: chloride channel 7
4 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
5 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
6 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G440600 expressed protein -
8 Sobic.003G228100 cytochrome P450 72A1, putative, expressed -
9 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
10 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
11 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G193700 transmembrane protein 56, putative, expressed -
13 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
14 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
15 Sobic.004G005200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transmembrane protein 120A, putative, expressed -
16 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
18 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.002G009700 AMP-binding domain containing protein, expressed -
20 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -


Gene co-expression network
sample Sobic001G350700 Sobic001G350700 Sobic001G003000 Sobic001G003000 Sobic001G350700--Sobic001G003000 Sobic001G217400 Sobic001G217400 Sobic001G350700--Sobic001G217400 Sobic006G090500 Sobic006G090500 Sobic001G350700--Sobic006G090500 Sobic006G271200 Sobic006G271200 Sobic001G350700--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic001G350700--Sobic006G214200 Sobic001G305500 Sobic001G305500 Sobic001G350700--Sobic001G305500 Sobic001G440600 Sobic001G440600 Sobic001G350700--Sobic001G440600 Sobic003G228100 Sobic003G228100 Sobic001G350700--Sobic003G228100 Sobic004G341200 Sobic004G341200 Sobic001G350700--Sobic004G341200 Sobic001G003000--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic001G003000--Sobic001G089800 Sobic009G126900 Sobic009G126900 Sobic001G003000--Sobic009G126900 Sobic004G102400 Sobic004G102400 Sobic001G003000--Sobic004G102400 Sobic006G237900 Sobic006G237900 Sobic001G003000--Sobic006G237900 Sobic003G005600 Sobic003G005600 Sobic001G003000--Sobic003G005600 Sobic010G043400 Sobic010G043400 Sobic001G003000--Sobic010G043400 Sobic009G193700 Sobic009G193700 Sobic001G003000--Sobic009G193700 Sobic001G003000--Sobic001G350700 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic003G320700 Sobic003G320700 Sobic001G217400--Sobic003G320700 Sobic007G210500 Sobic007G210500 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic001G217400--Sobic006G271200 Sobic002G130800 Sobic002G130800 Sobic006G090500--Sobic002G130800 Sobic006G090500--Sobic001G350700 Sobic006G135600 Sobic006G135600 Sobic006G090500--Sobic006G135600 Sobic001G481900 Sobic001G481900 Sobic006G090500--Sobic001G481900 Sobic008G093000 Sobic008G093000 Sobic006G090500--Sobic008G093000 Sobic004G005200 Sobic004G005200 Sobic006G090500--Sobic004G005200 Sobic001G070000 Sobic001G070000 Sobic006G090500--Sobic001G070000 Sobic004G233200 Sobic004G233200 Sobic006G090500--Sobic004G233200 Sobic001G159600 Sobic001G159600 Sobic006G090500--Sobic001G159600 Sobic006G271200--Sobic001G003000 Sobic006G271200--Sobic006G237900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic006G271200--Sobic001G089800 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic003G257100 Sobic003G257100 Sobic006G214200--Sobic003G257100 Sobic009G029600 Sobic009G029600 Sobic006G214200--Sobic009G029600 Sobic010G107000 Sobic010G107000 Sobic006G214200--Sobic010G107000 Sobic008G153400 Sobic008G153400 Sobic006G214200--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic006G214200--Sobic003G355600 Sobic009G211400 Sobic009G211400 Sobic006G214200--Sobic009G211400 Sobic006G199000 Sobic006G199000 Sobic006G214200--Sobic006G199000 Sobic006G204900 Sobic006G204900 Sobic006G214200--Sobic006G204900 Sobic003G138200 Sobic003G138200 Sobic006G214200--Sobic003G138200 Sobic006G104600 Sobic006G104600 Sobic001G305500--Sobic006G104600 Sobic002G262300 Sobic002G262300 Sobic001G305500--Sobic002G262300 Sobic001G207400 Sobic001G207400 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic002G266000 Sobic002G266000 Sobic001G305500--Sobic002G266000 Sobic006G087700 Sobic006G087700 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic001G305500--Sobic007G210500 Sobic001G305500--Sobic006G199000 Sobic001G440600--Sobic003G005600 Sobic001G440600--Sobic001G003000 Sobic001G107600 Sobic001G107600 Sobic001G440600--Sobic001G107600 Sobic003G352600 Sobic003G352600 Sobic001G440600--Sobic003G352600 Sobic003G036800 Sobic003G036800 Sobic001G440600--Sobic003G036800 Sobic002G427050 Sobic002G427050 Sobic001G440600--Sobic002G427050 Sobic001G474700 Sobic001G474700 Sobic001G440600--Sobic001G474700 Sobic007G060201 Sobic007G060201 Sobic001G440600--Sobic007G060201 Sobic001G440600--Sobic001G350700 Sobic001G185500 Sobic001G185500 Sobic003G228100--Sobic001G185500 Sobic003G228100--Sobic001G089800 Sobic003G228100--Sobic001G003000 Sobic003G228100--Sobic001G350700 Sobic004G042300 Sobic004G042300 Sobic003G228100--Sobic004G042300 Sobic003G228100--Sobic008G093000 Sobic003G098000 Sobic003G098000 Sobic003G228100--Sobic003G098000 Sobic003G228100--Sobic004G005200 Sobic003G228100--Sobic003G352600 Sobic004G341200--Sobic001G089800 Sobic002G322900 Sobic002G322900 Sobic004G341200--Sobic002G322900 Sobic009G167700 Sobic009G167700 Sobic004G341200--Sobic009G167700 Sobic001G512800 Sobic001G512800 Sobic004G341200--Sobic001G512800 Sobic004G341200--Sobic009G193700 Sobic001G488500 Sobic001G488500 Sobic004G341200--Sobic001G488500 Sobic004G341200--Sobic001G003000 Sobic004G236600 Sobic004G236600 Sobic004G341200--Sobic004G236600 Sobic003G338400 Sobic003G338400 Sobic004G341200--Sobic003G338400
Octagon: transcription factors


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