Gene annotation
Transcriptome id Sobic.001G305500.2,Sobic.001G305500.1
Synonym Sb01g029740
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QM11 , A0A1B6QM13
Pfam PF12552 PF14309
Panther DB PTHR21726 PTHR21726:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45900 : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
RAP-DB (Rice) LOC_Os10g40250.1,LOC_Os10g40250.2 : expressed protein
MaizeGDB (Corn) Zm00025a052015 , Zm00025a003275
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
3 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
4 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
5 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
6 Sobic.006G087700 T-complex protein 11, putative, expressed -
7 Sobic.004G314700 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
9 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
10 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
11 Sobic.003G322700 expressed protein -
12 Sobic.001G282600 transporter family protein, putative, expressed -
13 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
15 Sobic.001G481900 SAC domain containing protein, putative, expressed -
16 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
18 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
19 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
20 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G305500 Sobic001G305500 Sobic006G104600 Sobic006G104600 Sobic001G305500--Sobic006G104600 Sobic002G262300 Sobic002G262300 Sobic001G305500--Sobic002G262300 Sobic001G207400 Sobic001G207400 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic002G266000 Sobic002G266000 Sobic001G305500--Sobic002G266000 Sobic006G087700 Sobic006G087700 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic007G210500 Sobic007G210500 Sobic001G305500--Sobic007G210500 Sobic006G199000 Sobic006G199000 Sobic001G305500--Sobic006G199000 Sobic001G282600 Sobic001G282600 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G104600--Sobic003G320700 Sobic006G104600--Sobic001G305500 Sobic002G128200 Sobic002G128200 Sobic006G104600--Sobic002G128200 Sobic003G322700 Sobic003G322700 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic005G149700 Sobic005G149700 Sobic006G104600--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic006G104600--Sobic004G225200 Sobic002G262300--Sobic007G210500 Sobic009G080400 Sobic009G080400 Sobic002G262300--Sobic009G080400 Sobic002G262300--Sobic001G305500 Sobic002G262300--Sobic006G104600 Sobic002G262300--Sobic002G128200 Sobic002G262300--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic002G262300--Sobic001G517800 Sobic003G242000 Sobic003G242000 Sobic002G262300--Sobic003G242000 Sobic001G062300 Sobic001G062300 Sobic002G262300--Sobic001G062300 Sobic004G355000 Sobic004G355000 Sobic001G207400--Sobic004G355000 Sobic002G430000 Sobic002G430000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic003G398100--Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic003G398100--Sobic008G153400 Sobic009G207600 Sobic009G207600 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G257100 Sobic003G257100 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G355600 Sobic003G355600 Sobic003G398100--Sobic003G355600 Sobic003G398100--Sobic003G322700 Sobic001G150600 Sobic001G150600 Sobic003G398100--Sobic001G150600 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic006G087700--Sobic010G139600 Sobic003G301900 Sobic003G301900 Sobic006G087700--Sobic003G301900 Sobic006G087700--Sobic003G320700 Sobic006G087700--Sobic006G204900 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600 Sobic004G314700--Sobic001G050200 Sobic007G060201 Sobic007G060201 Sobic004G314700--Sobic007G060201 Sobic004G314700--Sobic001G305500 Sobic004G314700--Sobic001G207400 Sobic010G232600 Sobic010G232600 Sobic004G314700--Sobic010G232600 Sobic004G351100 Sobic004G351100 Sobic004G314700--Sobic004G351100 Sobic001G196500 Sobic001G196500 Sobic004G314700--Sobic001G196500 Sobic001G107600 Sobic001G107600 Sobic004G314700--Sobic001G107600 Sobic001G415300 Sobic001G415300 Sobic004G314700--Sobic001G415300 Sobic007G210500--Sobic001G282600 Sobic007G210500--Sobic002G262300 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic007G210500--Sobic006G104600 Sobic001G217400 Sobic001G217400 Sobic007G210500--Sobic001G217400 Sobic007G210500--Sobic004G225200 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700
Octagon: transcription factors


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