Gene annotation
Transcriptome id Sobic.006G087700.1
Synonym Sb06g017340
Functional annotation T-complex protein 11, putative, expressed
UniProt A0A1B6PL11
Pfam PF05794
Panther DB PTHR12832 PTHR12832:SF19
NCBI CDD KOG1981; SOK1 kinase belonging to the STE20/SPS1/GC kinase family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22930 : T-complex protein 11
RAP-DB (Rice) LOC_Os04g35840.1 : T-complex protein 11, putative, expressed
MaizeGDB (Corn) Zm00025a008159 , Zm00025a008158 , Zm00025a031605 , Zm00025a011298
Brachypodium KQJ82746
Barley HORVU2Hr1G076590.3 , HORVU6Hr1G033490.10 , HORVU2Hr1G076590.1 , HORVU2Hr1G076590.6 , HORVU6Hr1G033490.8 , HORVU2Hr1G076620.15 , HORVU2Hr1G076620.17 , HORVU6Hr1G033490.11 , HORVU2Hr1G076590.2 , HORVU6Hr1G033490.13 , HORVU6Hr1G033490.12 , HORVU6Hr1G033490.14 , HORVU6Hr1G033490.17 , HORVU6Hr1G033490.16 , HORVU2Hr1G076590.5 , HORVU2Hr1G076620.10 , HORVU2Hr1G076590.4 , HORVU2Hr1G076620.11 , HORVU2Hr1G076620.1 , HORVU2Hr1G076620.3 , HORVU2Hr1G076620.2 , HORVU2Hr1G076620.5 , HORVU2Hr1G076620.4 , HORVU2Hr1G076620.7 , HORVU2Hr1G076620.6 , HORVU2Hr1G076620.9 , HORVU2Hr1G076620.8 , HORVU2Hr1G076620.14 , HORVU2Hr1G076620.16 , HORVU6Hr1G033490.9 , HORVU2Hr1G076620.13 , HORVU2Hr1G076620.12 , HORVU6Hr1G033490.5 , HORVU6Hr1G033490.4 , HORVU6Hr1G033490.7 , HORVU6Hr1G033490.6 , HORVU6Hr1G033490.1 , HORVU2Hr1G076620.18 , HORVU6Hr1G033490.3 , HORVU6Hr1G033490.2
Wheat TraesCS2D02G306300 , TraesCS2D02G306200 , TraesCS2D02G306200 , TraesCS2A02G308000 , TraesCS6B02G192800 , TraesCS2B02G324500 , TraesCS2B02G324500 , TraesCS2B02G324600 , TraesCS6D02G154000 , TraesCS2A02G308100 , TraesCS2D02G306300 , TraesCS2A02G307900 , TraesCS2B02G324400
Populus -


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cDNA sequences
Sobic.006G087700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075400 expressed protein -
2 Sobic.003G322700 expressed protein -
3 Sobic.006G233500 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
5 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
6 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
8 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
9 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
10 Sobic.009G011600 expressed protein -
11 Sobic.010G175400 - -
12 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
15 Sobic.001G517800 NIN, putative, expressed -
16 Sobic.001G481900 SAC domain containing protein, putative, expressed -
17 Sobic.004G355000 SAC9, putative, expressed -
18 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
20 Sobic.004G053700 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase


Gene co-expression network
sample Sobic006G087700 Sobic006G087700 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic003G322700 Sobic003G322700 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic010G139600 Sobic010G139600 Sobic006G087700--Sobic010G139600 Sobic003G301900 Sobic003G301900 Sobic006G087700--Sobic003G301900 Sobic003G320700 Sobic003G320700 Sobic006G087700--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600 Sobic007G075400--Sobic010G139600 Sobic009G053900 Sobic009G053900 Sobic007G075400--Sobic009G053900 Sobic004G331100 Sobic004G331100 Sobic007G075400--Sobic004G331100 Sobic002G008900 Sobic002G008900 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic003G422500 Sobic003G422500 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic002G266000 Sobic002G266000 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic004G034600 Sobic004G034600 Sobic003G322700--Sobic004G034600 Sobic006G233500--Sobic006G087700 Sobic006G233500--Sobic003G320700 Sobic007G004500 Sobic007G004500 Sobic006G233500--Sobic007G004500 Sobic003G317500 Sobic003G317500 Sobic006G233500--Sobic003G317500 Sobic006G233500--Sobic003G301900 Sobic008G094400 Sobic008G094400 Sobic006G233500--Sobic008G094400 Sobic006G233500--Sobic003G322700 Sobic003G051600 Sobic003G051600 Sobic006G233500--Sobic003G051600 Sobic006G233500--Sobic002G266000 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic003G301900--Sobic002G146300 Sobic001G517800 Sobic001G517800 Sobic003G301900--Sobic001G517800 Sobic003G301900--Sobic010G139600 Sobic003G190400 Sobic003G190400 Sobic003G301900--Sobic003G190400 Sobic005G149200 Sobic005G149200 Sobic003G301900--Sobic005G149200 Sobic003G301900--Sobic003G320700 Sobic006G219600 Sobic006G219600 Sobic003G301900--Sobic006G219600 Sobic003G301900--Sobic006G087700 Sobic007G190000 Sobic007G190000 Sobic003G301900--Sobic007G190000 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic006G204900--Sobic004G355000 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic005G149700 Sobic005G149700 Sobic002G128200--Sobic005G149700 Sobic002G128200--Sobic006G104600 Sobic006G002300 Sobic006G002300 Sobic002G128200--Sobic006G002300 Sobic002G128200--Sobic006G087700 Sobic004G179300 Sobic004G179300 Sobic002G128200--Sobic004G179300 Sobic002G128200--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic002G128200--Sobic009G011600 Sobic002G128200--Sobic001G517800 Sobic001G375100 Sobic001G375100 Sobic002G128200--Sobic001G375100 Sobic004G266400 Sobic004G266400 Sobic006G043600--Sobic004G266400 Sobic010G138000 Sobic010G138000 Sobic006G043600--Sobic010G138000 Sobic006G043600--Sobic004G065000 Sobic006G043600--Sobic009G133500 Sobic010G224000 Sobic010G224000 Sobic006G043600--Sobic010G224000 Sobic006G043600--Sobic006G087700 Sobic001G121200 Sobic001G121200 Sobic006G043600--Sobic001G121200 Sobic006G043600--Sobic010G001500 Sobic006G043600--Sobic006G204900
Octagon: transcription factors


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